Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00422
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 18
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00422The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00422 |
ChrUn:7490918-8094030 | Chr09:33714603-34655354 | mixed | 18 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 18 · Showing 1–18 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkAUNG027900 | LXL04_038219 | JCVI_TKOH_00422 | 99.5 | 99.055 / 76.614 | Complex |
TkAUNG027910 | LXL04_038220 | JCVI_TKOH_00422 | 98.4 | 89.512 / 100.0 | Complex |
TkAUNG027960 | LXL04_038221 | JCVI_TKOH_00422 | 100.0 | 100.0 / 100.0 | Complex |
TkAUNG028010 | LXL04_038222 | JCVI_TKOH_00422 | 99.1 | 98.148 / 34.603 | Review |
TkAUNG028020 | LXL04_038220 | JCVI_TKOH_00422 | 98.5 | 81.513 / 52.861 | Complex |
TkAUNG028080 | LXL04_038221 | JCVI_TKOH_00422 | 91.4 | 90.947 / 83.396 | Complex |
TkAUNG028130 | LXL04_038222 | JCVI_TKOH_00422 | 99.8 | 94.658 / 48.205 | Review |
TkAUNG028140 | LXL04_038222 | JCVI_TKOH_00422 | 99.6 | 100.0 / 50.598 | Review |
TkAUNG028260 | LXL04_038223 | JCVI_TKOH_00422 | 100.0 | 100.0 / 100.0 | Probable |
TkAUNG028860 | LXL04_038201 | JCVI_TKOH_00422 | 88.6 | 30.792 / 93.75 | Review |
TkAUNG028910 | LXL04_038202 | JCVI_TKOH_00422 | 47.9 | 96.396 / 95.059 | Complex |
TkAUNG029010 | LXL04_038200 | JCVI_TKOH_00422 | 96.2 | 99.774 / 99.773 | Probable |
TkAUNG029020 | LXL04_038198 | JCVI_TKOH_00422 | 99.5 | 100.0 / 100.0 | Probable |
TkAUNG029130 | LXL04_038196 | JCVI_TKOH_00422 | 87.9 | 100.0 / 100.0 | Review |
TkAUNG029170 | LXL04_038192 | JCVI_TKOH_00422 | 95.0 | 98.736 / 99.887 | Probable |
TkAUNG029230 | LXL04_038191 | JCVI_TKOH_00422 | 90.1 | 81.982 / 85.047 | Complex |
TkAUNG029320 | LXL04_038189 | JCVI_TKOH_00422 | 98.8 | 87.634 / 79.319 | Complex |
TkAUNG030110 | LXL04_038187 | JCVI_TKOH_00422 | 79.1 | 37.719 / 22.632 | Review |