Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00418
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 19
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00418The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00418 |
ChrUn:16470376-17433580 | Chr08:30423612-31349625 | + | 19 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 19 · Showing 1–19 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkAUNG057610 | LXL04_035839 | JCVI_TKOH_00418 | 100.0 | 100.0 / 100.0 | Review |
TkAUNG057900 | LXL04_035845 | JCVI_TKOH_00418 | 98.7 | 83.15 / 100.0 | Complex |
TkAUNG057930 | LXL04_035847 | JCVI_TKOH_00418 | 99.7 | 100.0 / 66.466 | Complex |
TkAUNG057970 | LXL04_035848 | JCVI_TKOH_00418 | 100.0 | 100.0 / 100.0 | Complex |
TkAUNG057980 | LXL04_035850 | JCVI_TKOH_00418 | 99.8 | 100.0 / 100.0 | Review |
TkAUNG058050 | LXL04_035866 | JCVI_TKOH_00418 | 100.0 | 90.083 / 32.831 | Review |
TkAUNG058460 | LXL04_035870 | JCVI_TKOH_00418 | 98.8 | 100.0 / 62.403 | Complex |
TkAUNG058560 | LXL04_035870 | JCVI_TKOH_00418 | 97.5 | 100.0 / 62.403 | Complex |
TkAUNG058690 | LXL04_035870 | JCVI_TKOH_00418 | 97.3 | 100.0 / 100.0 | Review |
TkAUNG058700 | LXL04_035871 | JCVI_TKOH_00418 | 100.0 | 100.0 / 100.0 | Complex |
TkAUNG058780 | LXL04_035876 | JCVI_TKOH_00418 | 87.0 | 85.106 / 82.051 | Complex |
TkAUNG058790 | LXL04_035877 | JCVI_TKOH_00418 | 91.1 | 94.651 / 91.247 | Complex |
TkAUNG058810 | LXL04_035878 | JCVI_TKOH_00418 | 88.9 | 98.71 / 30.237 | Complex |
TkAUNG059330 | LXL04_035880 | JCVI_TKOH_00418 | 100.0 | 99.381 / 92.775 | Complex |
TkAUNG059710 | LXL04_035882 | JCVI_TKOH_00418 | 85.0 | 100.0 / 100.0 | Complex |
TkAUNG059720 | LXL04_035883 | JCVI_TKOH_00418 | 100.0 | 100.0 / 100.0 | Review |
TkAUNG059730 | LXL04_035884 | JCVI_TKOH_00418 | 100.0 | 96.947 / 76.97 | Complex |
TkAUNG059740 | LXL04_035885 | JCVI_TKOH_00418 | 100.0 | 91.667 / 100.0 | Complex |
TkAUNG059790 | LXL04_035886 | JCVI_TKOH_00418 | 100.0 | 100.0 / 89.706 | Complex |