Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00278
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 23
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00278The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00278 |
Chr06:70066517-75471968 | Chr05:54506959-61423499 | mixed | 23 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 23 · Showing 1–23 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G276650 | LXL04_023594 | JCVI_TKOH_00278 | 84.2 | 98.958 / 66.946 | Review |
TkA06G276870 | LXL04_023595 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G277270 | LXL04_023595 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G277370 | LXL04_023596 | JCVI_TKOH_00278 | 60.4 | 100.0 / 100.0 | Complex |
TkA06G277850 | LXL04_023597 | JCVI_TKOH_00278 | 100.0 | 87.037 / 87.578 | Strict |
TkA06G280300 | LXL04_023609 | JCVI_TKOH_00278 | 81.5 | 100.0 / 100.0 | Complex |
TkA06G282430 | LXL04_023610 | JCVI_TKOH_00278 | 95.2 | 100.0 / 100.0 | Complex |
TkA06G282500 | LXL04_023611 | JCVI_TKOH_00278 | 83.6 | 100.0 / 87.5 | Complex |
TkA06G284510 | LXL04_023615 | JCVI_TKOH_00278 | 94.6 | 100.0 / 100.0 | Probable |
TkA06G286320 | LXL04_023619 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G286460 | LXL04_023620 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G286750 | LXL04_023623 | JCVI_TKOH_00278 | 95.1 | 98.204 / 30.654 | Review |
TkA06G286760 | LXL04_023623 | JCVI_TKOH_00278 | 79.1 | 100.0 / 100.0 | Complex |
TkA06G288900 | LXL04_023625 | JCVI_TKOH_00278 | 95.5 | 93.22 / 62.5 | Complex |
TkA06G289610 | LXL04_023627 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G295120 | LXL04_023654 | JCVI_TKOH_00278 | 100.0 | 93.458 / 86.957 | Review |
TkA06G295150 | LXL04_023651 | JCVI_TKOH_00278 | 99.5 | 100.0 / 100.0 | Complex |
TkA06G296620 | LXL04_023649 | JCVI_TKOH_00278 | 100.0 | 100.0 / 41.221 | Review |
TkA06G296630 | LXL04_023650 | JCVI_TKOH_00278 | 75.0 | 100.0 / 100.0 | Complex |
TkA06G297010 | LXL04_023651 | JCVI_TKOH_00278 | 99.5 | 100.0 / 100.0 | Complex |
TkA06G297040 | LXL04_023654 | JCVI_TKOH_00278 | 100.0 | 93.458 / 86.957 | Review |
TkA06G297640 | LXL04_023655 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Review |
TkA06G299260 | LXL04_023663 | JCVI_TKOH_00278 | 100.0 | 100.0 / 100.0 | Review |