Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00277
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 25
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00277The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00277 |
Chr06:62366585-69710119 | Chr05:47978973-54083514 | mixed | 25 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 25 · Showing 1–25 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G245960 | LXL04_023547 | JCVI_TKOH_00277 | 91.8 | 100.0 / 100.0 | Complex |
TkA06G249260 | LXL04_023528 | JCVI_TKOH_00277 | 100.0 | 95.122 / 92.857 | Complex |
TkA06G249270 | LXL04_023529 | JCVI_TKOH_00277 | 100.0 | 100.0 / 97.297 | Complex |
TkA06G251910 | LXL04_023532 | JCVI_TKOH_00277 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G253470 | LXL04_023536 | JCVI_TKOH_00277 | 99.9 | 100.0 / 100.0 | Strict |
TkA06G253530 | LXL04_023538 | JCVI_TKOH_00277 | 100.0 | 66.176 / 58.442 | Complex |
TkA06G254630 | LXL04_023542 | JCVI_TKOH_00277 | 98.9 | 94.474 / 80.38 | Review |
TkA06G255330 | LXL04_023546 | JCVI_TKOH_00277 | 100.0 | 57.561 / 26.222 | Review |
TkA06G255370 | LXL04_023547 | JCVI_TKOH_00277 | 100.0 | 100.0 / 100.0 | Complex |
TkA06G256000 | LXL04_023550 | JCVI_TKOH_00277 | 100.0 | 58.654 / 31.771 | Complex |
TkA06G257760 | LXL04_023551 | JCVI_TKOH_00277 | 100.0 | 100.0 / 61.135 | Complex |
TkA06G257850 | LXL04_023552 | JCVI_TKOH_00277 | 100.0 | 100.0 / 40.767 | Review |
TkA06G257860 | LXL04_023552 | JCVI_TKOH_00277 | 99.1 | 94.309 / 27.818 | Review |
TkA06G258410 | LXL04_023555 | JCVI_TKOH_00277 | 100.0 | 99.194 / 100.0 | Strict |
TkA06G260860 | LXL04_023592 | JCVI_TKOH_00277 | 99.7 | 91.818 / 67.035 | Review |
TkA06G262050 | LXL04_023591 | JCVI_TKOH_00277 | 93.1 | 98.722 / 62.056 | Review |
TkA06G262610 | LXL04_023590 | JCVI_TKOH_00277 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G263330 | LXL04_023587 | JCVI_TKOH_00277 | 47.5 | 100.0 / 89.344 | Complex |
TkA06G264870 | LXL04_023585 | JCVI_TKOH_00277 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G266650 | LXL04_023583 | JCVI_TKOH_00277 | 94.4 | 96.644 / 59.016 | Review |
TkA06G270140 | LXL04_023578 | JCVI_TKOH_00277 | 100.0 | 77.941 / 45.887 | Review |
TkA06G272350 | LXL04_023572 | JCVI_TKOH_00277 | 99.8 | 94.264 / 68.188 | Review |
TkA06G272980 | LXL04_023568 | JCVI_TKOH_00277 | 83.8 | 100.0 / 100.0 | Complex |
TkA06G274240 | LXL04_023567 | JCVI_TKOH_00277 | 97.6 | 100.0 / 100.0 | Strict |
TkA06G274760 | LXL04_023564 | JCVI_TKOH_00277 | 98.4 | 100.0 / 92.493 | Strict |