Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00263
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 15
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00263The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00263 |
Chr06:3633003-3910446 | Chr05:124996933-125226924 | + | 15 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 15 · Showing 1–15 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA06G013750 | LXL04_026346 | JCVI_TKOH_00263 | 98.3 | 97.468 / 61.93 | Complex |
TkA06G013760 | LXL04_026347 | JCVI_TKOH_00263 | 98.7 | 96.195 / 99.345 | Complex |
TkA06G013770 | LXL04_026348 | JCVI_TKOH_00263 | 93.6 | 100.0 / 100.0 | Probable |
TkA06G014050 | LXL04_026351 | JCVI_TKOH_00263 | 75.3 | 100.0 / 100.0 | Review |
TkA06G014220 | LXL04_026354 | JCVI_TKOH_00263 | 100.0 | 100.0 / 100.0 | Strict |
TkA06G014300 | LXL04_026358 | JCVI_TKOH_00263 | 99.2 | 98.819 / 97.287 | Strict |
TkA06G014310 | LXL04_026359 | JCVI_TKOH_00263 | 64.6 | 99.422 / 22.535 | Complex |
TkA06G014340 | LXL04_026359 | JCVI_TKOH_00263 | 98.0 | 99.433 / 41.197 | Review |
TkA06G014350 | LXL04_026359 | JCVI_TKOH_00263 | 99.5 | 100.0 / 51.056 | Review |
TkA06G014580 | LXL04_026361 | JCVI_TKOH_00263 | 100.0 | 100.0 / 100.0 | Review |
TkA06G014590 | LXL04_026362 | JCVI_TKOH_00263 | 100.0 | 100.0 / 100.0 | Review |
TkA06G014610 | LXL04_026363 | JCVI_TKOH_00263 | 97.0 | 100.0 / 100.0 | Complex |
TkA06G014630 | LXL04_026364 | JCVI_TKOH_00263 | 100.0 | 100.0 / 100.0 | Review |
TkA06G014640 | LXL04_026365 | JCVI_TKOH_00263 | 100.0 | 100.0 / 95.789 | Strict |
TkA06G014650 | LXL04_026366 | JCVI_TKOH_00263 | 99.4 | 100.0 / 100.0 | Strict |