Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00210
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 24
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00210The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00210 |
Chr04:130341179-131417200 | Chr09:64130512-64632339 | mixed | 24 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 24 · Showing 1–24 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA04G515830 | LXL04_039284 | JCVI_TKOH_00210 | 62.8 | 89.937 / 1.55 | Complex |
TkA04G517330 | LXL04_039283 | JCVI_TKOH_00210 | 83.5 | 67.808 / 34.054 | Complex |
TkA04G517340 | LXL04_039280 | JCVI_TKOH_00210 | 80.9 | 98.333 / 20.891 | Complex |
TkA04G517360 | LXL04_039282 | JCVI_TKOH_00210 | 95.5 | 99.714 / 57.166 | Review |
TkA04G517380 | LXL04_039280 | JCVI_TKOH_00210 | 99.3 | 99.257 / 82.335 | Complex |
TkA04G517560 | LXL04_039280 | JCVI_TKOH_00210 | 91.4 | 94.309 / 35.791 | Complex |
TkA04G517780 | LXL04_039273 | JCVI_TKOH_00210 | 98.4 | 100.0 / 67.266 | Complex |
TkA04G517910 | LXL04_039284 | JCVI_TKOH_00210 | 79.9 | 37.058 / 2.128 | Complex |
TkA04G517930 | LXL04_039287 | JCVI_TKOH_00210 | 65.1 | 67.291 / 4.582 | Complex |
TkA04G517950 | LXL04_039287 | JCVI_TKOH_00210 | 49.0 | 99.918 / 25.115 | Review |
TkA04G518040 | LXL04_039287 | JCVI_TKOH_00210 | 83.9 | 95.541 / 11.593 | Complex |
TkA04G518060 | LXL04_039287 | JCVI_TKOH_00210 | 61.6 | 94.718 / 14.407 | Complex |
TkA04G518070 | LXL04_039284 | JCVI_TKOH_00210 | 81.3 | 47.291 / 2.053 | Complex |
TkA04G518180 | LXL04_039284 | JCVI_TKOH_00210 | 97.4 | 45.794 / 2.096 | Complex |
TkA04G518230 | LXL04_039284 | JCVI_TKOH_00210 | 75.5 | 87.353 / 9.355 | Complex |
TkA04G518270 | LXL04_039284 | JCVI_TKOH_00210 | 90.1 | 84.283 / 8.286 | Complex |
TkA04G518370 | LXL04_039283 | JCVI_TKOH_00210 | 78.8 | 65.283 / 34.054 | Complex |
TkA04G518400 | LXL04_039282 | JCVI_TKOH_00210 | 98.9 | 93.668 / 56.369 | Review |
TkA04G518410 | LXL04_039280 | JCVI_TKOH_00210 | 99.7 | 99.656 / 89.094 | Complex |
TkA04G518420 | LXL04_039279 | JCVI_TKOH_00210 | 98.1 | 100.0 / 68.441 | Review |
TkA04G518480 | LXL04_039278 | JCVI_TKOH_00210 | 100.0 | 97.531 / 58.955 | Review |
TkA04G518520 | LXL04_039284 | JCVI_TKOH_00210 | 46.9 | 54.927 / 3.635 | Complex |
TkA04G518560 | LXL04_039275 | JCVI_TKOH_00210 | 95.6 | 81.081 / 32.967 | Complex |
TkA04G519460 | LXL04_039268 | JCVI_TKOH_00210 | 99.9 | 71.88 / 91.295 | Probable |