Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00150
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 11
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00150The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00150 |
Chr03:104450474-105294372 | Chr03:112109515-113004496 | mixed | 11 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 11 · Showing 1–11 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA03G419610 | LXL04_016141 | JCVI_TKOH_00150 | 99.1 | 96.903 / 44.877 | Review |
TkA03G419750 | LXL04_016144 | JCVI_TKOH_00150 | 99.3 | 97.811 / 15.94 | Review |
TkA03G419970 | LXL04_016148 | JCVI_TKOH_00150 | 78.6 | 96.429 / 100.0 | Complex |
TkA03G420210 | LXL04_016150 | JCVI_TKOH_00150 | 96.9 | 100.0 / 100.0 | Review |
TkA03G420220 | LXL04_016151 | JCVI_TKOH_00150 | 98.4 | 100.0 / 100.0 | Complex |
TkA03G420260 | LXL04_016152 | JCVI_TKOH_00150 | 99.7 | 93.023 / 87.848 | Complex |
TkA03G421010 | LXL04_016156 | JCVI_TKOH_00150 | 90.1 | 96.414 / 42.456 | Complex |
TkA03G421020 | LXL04_016156 | JCVI_TKOH_00150 | 100.0 | 82.524 / 14.912 | Complex |
TkA03G421260 | LXL04_016157 | JCVI_TKOH_00150 | 95.2 | 100.0 / 97.097 | Complex |
TkA03G421590 | LXL04_016159 | JCVI_TKOH_00150 | 100.0 | 100.0 / 100.0 | Complex |
TkA03G422910 | LXL04_016163 | JCVI_TKOH_00150 | 95.0 | 99.507 / 91.261 | Complex |