Orthology / Synteny Evidence
Inspect cross-reference orthology and synteny-block evidence.
Evidence boundary: TK1151 and OH-1004 are different materials of the same species. This page shows ortholog and synteny ID correspondence between two reference genomes, not a same-cultivar genome-version upgrade. Blocks are based on DIAMOND RBH plus coordinate-order anchors and can be further refined by MCScanX/JCVI. JCVI_TKOH_ block IDs are also accepted.
Global Block Summary
Synteny blocks
427
ID converter records
84884
High confidence
302
Medium confidence
125
| Material | Assembly | Genes | Gap runs | Telomere scan |
|---|---|---|---|---|
| TK1151 | TK1151_GWHBCHF00000000 |
45224 | 1917 | 0/9 |
| OH-1004 | OH1004_GCA_047496595.1 |
40057 | 131 | 0/711 |
Query Interpretation
Input ID
JCVI_TKOH_00082
Query type
Block ID
Crosswalk plus synteny evidence
Resolved gene
None
No rubber dandelion gene was resolved
Linked evidence
0 / 1 / 18
crosswalk / blocks / anchors
Best block:
JCVI_TKOH_00082The query resolves to a synteny-block ID. Block span and anchor genes are shown first.
Linear Synteny View
The best synteny block for the current query is shown as a linear ribbon.
High
Medium
Other
Only the first 12 anchors are drawn
The anchor table is paginated; TSV contains all anchors for the current query. The ribbon shows only a partial linear backbone of the current block.
Current Query Evidence
No ID correspondence record is available for the current query.
Synteny Evidence
| Block | Query location | Target location | Orientation | Current mapped anchors | Confidence | Note |
|---|---|---|---|---|---|---|
JCVI_TKOH_00082 |
Chr02:43322023-44366149 | Chr03:116264397-117565909 | mixed | 18 | High | Formal JCVI synteny block from rebuilt ID map pipeline. |
Block Anchor Genes
Total anchors: 18 · Showing 1–18 · Page 1/1
| TK1151 gene | OH-1004 gene | Block | Identity | Coverage | Confidence |
|---|---|---|---|---|---|
TkA02G169570 | LXL04_016277 | JCVI_TKOH_00082 | 44.3 | 97.418 / 70.266 | Complex |
TkA02G169730 | LXL04_016276 | JCVI_TKOH_00082 | 74.7 | 98.655 / 76.371 | Complex |
TkA02G169750 | LXL04_016274 | JCVI_TKOH_00082 | 97.7 | 100.0 / 100.0 | Review |
TkA02G169870 | LXL04_016277 | JCVI_TKOH_00082 | 80.3 | 99.206 / 60.24 | Complex |
TkA02G169960 | LXL04_016274 | JCVI_TKOH_00082 | 100.0 | 100.0 / 100.0 | Review |
TkA02G170650 | LXL04_016264 | JCVI_TKOH_00082 | 97.7 | 88.776 / 71.02 | Complex |
TkA02G170660 | LXL04_016263 | JCVI_TKOH_00082 | 100.0 | 100.0 / 94.301 | Review |
TkA02G170840 | LXL04_016255 | JCVI_TKOH_00082 | 83.6 | 93.28 / 79.577 | Complex |
TkA02G170850 | LXL04_016261 | JCVI_TKOH_00082 | 99.4 | 100.0 / 100.0 | Strict |
TkA02G170880 | LXL04_016260 | JCVI_TKOH_00082 | 89.0 | 96.277 / 54.593 | Complex |
TkA02G170980 | LXL04_016260 | JCVI_TKOH_00082 | 84.6 | 100.0 / 12.651 | Complex |
TkA02G171130 | LXL04_016255 | JCVI_TKOH_00082 | 100.0 | 95.531 / 80.282 | Complex |
TkA02G171170 | LXL04_016255 | JCVI_TKOH_00082 | 77.2 | 96.325 / 79.343 | Complex |
TkA02G171400 | LXL04_016254 | JCVI_TKOH_00082 | 78.6 | 71.852 / 43.46 | Review |
TkA02G171450 | LXL04_016253 | JCVI_TKOH_00082 | 99.2 | 100.0 / 100.0 | Complex |
TkA02G171490 | LXL04_016249 | JCVI_TKOH_00082 | 94.0 | 100.0 / 100.0 | Complex |
TkA02G171510 | LXL04_016246 | JCVI_TKOH_00082 | 81.1 | 100.0 / 76.891 | Complex |
TkA02G171580 | LXL04_016245 | JCVI_TKOH_00082 | 84.0 | 95.238 / 79.681 | Complex |