TkAUNG061090 | RubberDandelionOmics

Gene overview

TkAUNG061090

Reference: TK1151 Chr: ChrUn Coordinates: 17774980-17775537 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

558 bp · TkAUNG061090|TK1151|cDNA

GATCCACATCTTCACCAAGATCTGGCTCACCGCCGTCGTCTCCCTGATATTCTGCCACCAAATCGGCGGCCGAATCCCCGGCAGCGGCGCAAGGCTCCTCTTAGTCCTCCCCATCATCTACCTCTTCACCACCCTCCCCTCCAGCTGTCCTCCTGCAGTTTTCATCTGGCGGGCCCCACTATCTTCTACCTTGTTTGGCTGGGCAACTTCAAGCTCCTCCTCTTTGCTTTCAACCAAGGCCCTCTCTCCACCACCCCGCC...

CDS

Download CDS FASTA

558 bp · TkAUNG061090|TK1151|CDS

GATCCACATCTTCACCAAGATCTGGCTCACCGCCGTCGTCTCCCTGATATTCTGCCACCAAATCGGCGGCCGAATCCCCGGCAGCGGCGCAAGGCTCCTCTTAGTCCTCCCCATCATCTACCTCTTCACCACCCTCCCCTCCAGCTGTCCTCCTGCAGTTTTCATCTGGCGGGCCCCACTATCTTCTACCTTGTTTGGCTGGGCAACTTCAAGCTCCTCCTCTTTGCTTTCAACCAAGGCCCTCTCTCCACCACCCCGCC...

Protein

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185 aa · TkAUNG061090|TK1151|PROTEIN

DPHLHQDLAHRRRLPDILPPNRRPNPRQRRKAPLSPPHHLPLHHPPLQLSSCSFHLAGPTIFYLVWLGNFKLLLFAFNQGPLSTTPPLPLLHFVSIALLPIKTKHLSISSTNKHTYKPSQFLLKSGLLALIIYLYNYRESIHPFLILALYCCHVYLGVELLLAITAVPVRAVLGWSWSHSSTSRI

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkAUNG061090`
TK1151 ID	TkAUNG061090
OH-1004 ID	LXL04_031014
Relationship / confidence	Non Reciprocal Best Hit / Complex relationship
Protein identity (%)	52.700
Protein coverage (%)	TK1151 71.351 / OH-1004 40.227 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID TkAUNG061090

Location ChrUn:17774980-17775537 (+)

Description Similar to Long-chain-alcohol O-fatty-acyltransferase

Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g51970`	Involved in the esterification of cycloartenol.	Biosynthesis of phytosterol esters: identification of a sterol o-acyltransferase in Arabidopsis.2007 · DOI: 10.1104/pp.107.106278 Involvement of the phospholipid sterol acyltransferase1 in plant sterol homeostasis and leaf senescence.2010 · DOI: 10.1104/pp.109.145672
`At5g55380`	Catalyzes the final step in the synthesis of long-chain linear esters (waxes).	No verified direct reference in this release
`At5g55360`	Catalyzes the final step in the synthesis of long-chain linear esters (waxes).	No verified direct reference in this release
`At1g34520`	Catalyzes the final step in the synthesis of long-chain linear esters (waxes).	No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source

View annotation sources

Functional annotation source: OH1004 · LXL04_031014 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)

GO:0006629 lipid metabolic process Biological Process

GO:0016127 sterol catabolic process Biological Process

GO:0009507 chloroplast Cellular Component

GO:0016020 membrane Cellular Component

GO:0008374 O-acyltransferase activity Molecular Function

GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity Molecular Function

KEGG gene cross-reference

ath:AT3G51970

ath:AT5G55340

ath:AT5G55370

ath:AT5G55380

These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

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Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.538

Rank 1 · TkAUNG061090 · TK1151

Nucleus0.308

Rank 2 · TkAUNG061090 · TK1151

Cytoplasm0.132

Rank 3 · TkAUNG061090 · TK1151

Mitochondrion0.075

Rank 4 · TkAUNG061090 · TK1151

Cell membrane0.068

Rank 5 · TkAUNG061090 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

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Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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Protein	Organism	Description	Identity	Database	Confidence
`Q9SV07`	Arabidopsis thaliana	sp\|Q9SV07\|ASAT1_ARATH Acyl-CoA--sterol O-acyltransferase 1	41.300%	Swiss-Prot	Medium
`Q9FJ72`	Arabidopsis thaliana	sp\|Q9FJ72\|WAXS1_ARATH Probable long-chain-alcohol O-fatty-acyltransferase 1	39.500%	Swiss-Prot	Medium
`Q9FJ74`	Arabidopsis thaliana	sp\|Q9FJ74\|WAXS3_ARATH Probable long-chain-alcohol O-fatty-acyltransferase 3	34.700%	Swiss-Prot	Medium
`Q9LNL1`	Arabidopsis thaliana	sp\|Q9LNL1\|WAXS8_ARATH Probable long-chain-alcohol O-fatty-acyltransferase 8	35.500%	Swiss-Prot	Medium

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