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How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG032390
Reference: TK1151 Chr: ChrUn Coordinates: 8647555-8648207 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

405 bp · TkAUNG032390|TK1151|cDNA

TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAACTCTCTCTCACACTCTCTCTCTCTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCCCGCTTTAGATACAAAATTTCAAACACGTCCACAACTCATTACCAGTTAAAGTGGGT...

CDS

Download CDS FASTA

405 bp · TkAUNG032390|TK1151|CDS

TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAACTCTCTCTCACACTCTCTCTCTCTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCCCCGCTTTAGATACAAAATTTCAAACACGTCCACAACTCATTACCAGTTAAAGTGGGT...

Protein

Download Protein FASTA

134 aa · TkAUNG032390|TK1151|PROTEIN

YIYIYIYIYIYIYIYIYIYIYIYIYIYIKLSLTLSLSLYIYIYIYIYIYIYIYIYIYIYIYIYIYIYPRFRYKISNTSTTHYQLKWVSPAPLGSGPHGWRGIPVPFASLFVELGGSGIWAYIELNIFGALVNLG

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkAUNG032390
TK1151 IDTkAUNG032390
OH-1004 IDLXL04_010848
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)64.500
Protein coverage (%)TK1151 23.134 / OH-1004 4.306
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG032390
LocationChrUn:8647555-8648207 (+)
DescriptionSimilar to KMT2B: Histone-lysine N-methyltransferase 2B
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_010848 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006346 DNA methylation-dependent constitutive heterochromatin formation Biological Process
GO:0006351 DNA-templated transcription Biological Process
GO:0008284 positive regulation of cell population proliferation Biological Process
GO:0010468 regulation of gene expression Biological Process
GO:0031507 heterochromatin formation Biological Process
GO:0032259 methylation Biological Process
GO:0032922 circadian regulation of gene expression Biological Process
GO:0033148 positive regulation of intracellular estrogen receptor signaling pathway Biological Process
GO:0035864 response to potassium ion Biological Process
GO:0043627 response to estrogen Biological Process
GO:0045815 transcription initiation-coupled chromatin remodeling Biological Process
GO:0045893 positive regulation of DNA-templated transcription Biological Process
KEGG gene cross-reference
hsa:4297
hsa:9757
mmu:75410
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.280
Rank 1 · TkAUNG032390 · TK1151
Nucleus0.221
Rank 2 · TkAUNG032390 · TK1151
Endoplasmic reticulum0.211
Rank 3 · TkAUNG032390 · TK1151
Lysosome / Vacuole0.150
Rank 4 · TkAUNG032390 · TK1151
Extracellular0.121
Rank 5 · TkAUNG032390 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

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