Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1766 bp · TkA08G163940|TK1151|cDNA
TGGACCCGATTCCCAAATCTCATTGACACACAAAGCAACAGAAGCGTACTAGAGTTTGGCGAAACGCATCATCATATTCATCCCTCGATCATCACACTAGTGGTGAAAAGGGGCTAGCCTAGCAGCCATCAACAGTCACCACCATCGTAATCAATTTCACTTCAACTCAGCCCTACGCACACGCGGTGCCTTTATCGTTGCCGATTCCGGATATCAAGCGCTCAACTTCTCCCACATCTTCTTCTATCCGTCTAGTCATC...
1200 bp · TkA08G163940|TK1151|CDS
ATGGGGATCATAGAAAGGATCAAGGAAATTGAAGCCGAAATGGCACGTACCCAGAAAAACAAAGCAACAGAATATCATTTGGGTCAGCTCAAGGCTAAGATAGCAAAGCTAAGGACACAACTATTGGAGCCACCTAAAGGTACTAGTGGAGCTGGAGAGGGTTTTGAGGTCACAAAATACGGGCATGGACGTGTAGCACTGATAGGATTTCCAAGTGTGGGAAAGTCAACACTGTTGACCATGCTAACGGGAACACATTC...
Protein
Download Protein FASTA399 aa · TkA08G163940|TK1151|PROTEIN
MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGTSGAGEGFEVTKYGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVSKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKKPPQIYFKKKKTGGISFNSTMQLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMKCIYVYNKIDVVGIDDVDKLA...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G163940 |
|---|---|
| TK1151 ID | TkA08G163940 |
| OH-1004 ID | LXL04_032293 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G163940 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:42793595-42797207 (-) | |||||||||
| Description | Similar to DRG1: Developmentally-regulated G-protein 1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0002181 cytoplasmic translation Biological Process GO:0007165 signal transduction Biological Process GO:0005634 nucleus Cellular Component GO:0005654 nucleoplasm Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component GO:0010494 cytoplasmic stress granule Cellular Component GO:0016020 membrane Cellular Component GO:0031410 cytoplasmic vesicle Cellular Component GO:0003723 RNA binding Molecular Function GO:0003729 mRNA binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G17470 ath:AT1G72660 bta:507472 hsa:1819 mmu:13495 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF13401AAA_2262-172 aaPF01926MMR_HSR164-181 aaPF02421FeoB_N64-159 aaPF00005ABC_tran64-88 aaPF09439SRPRB64-118 aaPF13521AAA_2864-85 aaPF00350Dynamin_N65-96 aaPF00350Dynamin_N107-162 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA08G163940 | PF13401 | AAA_22 | 62 | 172 | 0.0048 | 17.9 |
| TkA08G163940 | PF01926 | MMR_HSR1 | 64 | 181 | 2.3e-24 | 86.4 |
| TkA08G163940 | PF02421 | FeoB_N | 64 | 159 | 1.3e-12 | 48.3 |
| TkA08G163940 | PF00005 | ABC_tran | 64 | 88 | 0.068 | 14.5 |
| TkA08G163940 | PF09439 | SRPRB | 64 | 118 | 0.14 | 12.2 |
| TkA08G163940 | PF13521 | AAA_28 | 64 | 85 | 0.28 | 12.1 |
| TkA08G163940 | PF00350 | Dynamin_N | 65 | 96 | 2.3e-05 | 25.2 |
| TkA08G163940 | PF00350 | Dynamin_N | 107 | 162 | 2.3e-05 | 25.2 |
| TkA08G163940 | PF16897 | MMR_HSR1_Xtn | 184 | 289 | 3.1e-42 | 143.6 |
| TkA08G163940 | PF02824 | TGS | 290 | 366 | 7.9e-22 | 77.8 |
| TkA08G163940 | PF13401 | AAA_22 | 304 | 355 | 0.0048 | 17.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.