Gene Card
Gene overview
cDNA / CDS / Protein Sequences
559 bp · TkA07G250880|TK1151|cDNA
GGTACAGACTTGGACCCATGTCTTCAAACCTCTTCTCAACCTTTTTGTAAAAAGGAAAAAAAAAACGGAGACCTAATCACAAAAAAAAAAGACGCTGGACTCCATCGTTCATCTTCTTCTTCGGCTCTTCTCCGTTCAATTGCAACCCACGCAGCTTCTCCACCTACATCATTCTCATCATCGCCGCCGGCGGTATGCCCTTTTCCGACGCCGTCAATGGCGGCTGCTTGCCCTATTCGGACGCCGACGTCGCCTGCTCG...
333 bp · TkA07G250880|TK1151|CDS
GGTACAGACTTGGACCCATGTCTTCAAACCTCTTCTCAACCTTTTTGTAAAAAGGAAAAAAAAAACGGAGACCTAATCACAAAAAAAAAAGACGCTGGACTCCATCGTTCATCTTCTTCTTCGGCTCTTCTCCGTTCAATTGCAACCCACGCAGCTTCTCCACCTACATCATTCTCATCATCGCCGCCGGCGGTATGCCCTTTTCCGACGCCGTCAATGGCGGCTGCTTGCCCTATTCGGACGCCGACGTCGCCTGCTCG...
Protein
Download Protein FASTA110 aa · TkA07G250880|TK1151|PROTEIN
GTDLDPCLQTSSQPFCKKEKKNGDLITKKKDAGLHRSSSSSALLRSIATHAASPPTSFSSSPPAVCPFPTPSMAAACPIRTPTSPARRRPLPASFFLPKTSPTEALCMGS
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G250880 |
|---|---|
| TK1151 ID | TkA07G250880 |
| OH-1004 ID | LXL04_024493 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 83.300 |
| Protein coverage (%) | TK1151 27.273 / OH-1004 17.857Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G250880 |
|---|---|
| Location | Chr07:62565777-62566836 (+) |
| Description | Similar to Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006099 tricarboxylic acid cycle Biological Process GO:0006104 succinyl-CoA metabolic process Biological Process GO:0006105 succinate metabolic process Biological Process GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component GO:0042709 succinate-CoA ligase complex Cellular Component GO:0000287 magnesium ion binding Molecular Function GO:0004775 succinate-CoA ligase (ADP-forming) activity Molecular Function GO:0004776 succinate-CoA ligase (GDP-forming) activity Molecular Function GO:0005507 copper ion binding Molecular Function GO:0005524 ATP binding Molecular Function |
| KEGG gene cross-reference | ath:AT2G20420 dosa:Os02g0621700 paa:Paes_0607 plt:Plut_0497 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.