Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1749 bp · LXL04_007664|LXL04_007664|OH1004|cDNA
ATGCACAAGTTTTTACGTCGGAACCCTTGTTCAGGAGGCCCCATCCTCTGCTCCTCACCTGACATTTTTATCCCGATAGGGTTTAAGCAAAAAAATCCCACTTCATTTACCCCCTTGATGCCTTACGCCGCCACCGCATCCCACCTACGTTCTTCCGGTATGGCGACTGCCATAGGCGGTGGAAACGCTTCCTTTGCTTTTGGTAACAGTAGCACATGTTCGACTTCTCCTCGTTTAGCTTCCAGTTCTAGCTTCAGCTG...
1749 bp · LXL04_007664|LXL04_007664|OH1004|CDS
ATGCACAAGTTTTTACGTCGGAACCCTTGTTCAGGAGGCCCCATCCTCTGCTCCTCACCTGACATTTTTATCCCGATAGGGTTTAAGCAAAAAAATCCCACTTCATTTACCCCCTTGATGCCTTACGCCGCCACCGCATCCCACCTACGTTCTTCCGGTATGGCGACTGCCATAGGCGGTGGAAACGCTTCCTTTGCTTTTGGTAACAGTAGCACATGTTCGACTTCTCCTCGTTTAGCTTCCAGTTCTAGCTTCAGCTG...
Protein
Download Protein FASTA582 aa · LXL04_007664|LXL04_007664|OH1004|PROTEIN
MHKFLRRNPCSGGPILCSSPDIFIPIGFKQKNPTSFTPLMPYAATASHLRSSGMATAIGGGNASFAFGNSSTCSTSPRLASSSSFSCRNCRCSVDNATAISSRAWAAFKENRSGSRVAWFHTSFSDKDVSVSALKSEDNSDSGGGDDEKPIKFNRRHRGSPVGGSNNAPPLLPGNPDLLRIPGVGPRNLRKLVENGIGAVAELKKIYKDKFFGKSNQKMVEFLRSSVGIVHRNHAESITTFIKESVDEELKDDHVNSNTQ...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_007664 |
|---|---|
| TK1151 ID | TkA03G203140 |
| OH-1004 ID | LXL04_007664 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 99.822 / OH-1004 96.220Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_007664 |
|---|---|
| Location | Chr02:55617924-55619999 (-) |
| Description | Similar to DCK: Deoxycytidine kinase |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006220 pyrimidine nucleotide metabolic process Biological Process GO:0009157 deoxyribonucleoside monophosphate biosynthetic process Biological Process GO:0032261 purine nucleotide salvage Biological Process GO:0043173 nucleotide salvage Biological Process GO:0046092 deoxycytidine metabolic process Biological Process GO:0106384 dGMP salvage Biological Process GO:1901293 nucleoside phosphate biosynthetic process Biological Process GO:0005634 nucleus Cellular Component GO:0005654 nucleoplasm Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component |
| KEGG gene cross-reference | bta:530642 gga:770922 hsa:1633 mmu:13178 rno:79127 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01712.26dNK269-523 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_007664 | PF01712.26 | dNK | 269 | 523 | 1.2e-49 | 169.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.