ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 3 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA04G443900
Chr04:111909438-111918586 (-)
GWHBCHF00000005
|
LXL04_038583
Chr09:44451013-44452044 (-)
CM104807.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
98.000 Q 100.000 / T 52.613 |
JCVI_TKOH_00204 | TkA04G443900 |
|
TkA04G443980
Chr04:111933259-111933720 (-)
GWHBCHF00000005
|
LXL04_038583
Chr09:44451013-44452044 (-)
CM104807.1
|
Annotation conflict | Sequence-supported with annotation/model conflict Review |
100.000 Q 100.000 / T 36.934 |
JCVI_TKOH_00204 | TkA04G443980 |
|
TkA04G444240
Chr04:111980429-111981221 (+)
GWHBCHF00000005
|
LXL04_038583
Chr09:44451013-44452044 (-)
CM104807.1
|
Many-to-one | Multiple TK1151 genes map to the same OH-1004 gene Complex |
87.100 Q 88.462 / T 48.432 |
JCVI_TKOH_00204 | TkA04G444240 |
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