ID Crosswalk
Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.
Version Sources
| Version | Assembly / Annotation Accession | Source Database | Publication | DOI / PMID | Download Date |
|---|---|---|---|---|---|
| TK1151 Taraxacum kok-saghyz |
GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein |
NGDC Genome Warehouse (GWH) |
Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022 |
10.1007/s11427-021-2033-2 PMID: 34939160 |
2026-08-14 |
| OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz |
GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF |
NCBI Assembly / NGDC integrated NCBI Assembly |
no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available |
not available | 2026-08-14 |
Complete Gene ID Crosswalk
TK1151 reference: 45224 genes; 8 rows in the current filter. Showing page 1 / 1.
All
Strict 1:1: 6347
Probable 1:1: 1703
One-to-many: 826
Many-to-one: 24458
Unmapped: 2782
Annotation conflict: 9108
Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.
| TK1151 Gene ID | OH-1004 Gene ID | Category | Relationship / confidence | Identity / coverage | Synteny block | Description |
|---|---|---|---|---|---|---|
|
TkA01G199500
Chr01:50887831-50888884 (+)
GWHBCHF00000002
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
72.300 Q 25.683 / T 7.004 |
TkA01G199500 | |
|
TkA01G361880
Chr01:89928926-89931521 (-)
GWHBCHF00000002
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
61.700 Q 66.228 / T 25.633 |
TkA01G361880 | |
|
TkA02G594080
Chr02:153267343-153273565 (+)
GWHBCHF00000003
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
60.500 Q 54.341 / T 58.420 |
TkA02G594080 | |
|
TkA04G067920
Chr04:17999601-18002922 (-)
GWHBCHF00000005
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Annotation conflict | RBH but below probable coverage or synteny threshold Review |
69.800 Q 92.105 / T 46.945 |
TkA04G067920 | |
|
TkA04G102240
Chr04:26574485-26576700 (-)
GWHBCHF00000005
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
78.200 Q 40.114 / T 31.446 |
TkA04G102240 | |
|
TkA04G398030
Chr04:100066298-100066714 (-)
GWHBCHF00000005
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
64.300 Q 40.580 / T 8.346 |
TkA04G398030 | |
|
TkA05G418780
Chr05:104323842-104325240 (+)
GWHBCHF00000006
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
81.300 Q 47.170 / T 11.177 |
TkA05G418780 | |
|
TkA07G279800
Chr07:69970502-69971645 (-)
GWHBCHF00000008
|
LXL04_034484
Chr07:102623323-102630472 (+)
CM104805.1
|
Many-to-one | non reciprocal best hit Complex |
79.600 Q 39.163 / T 15.201 |
TkA07G279800 |
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