Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1434 bp · LXL04_024376|LXL04_024376|OH1004|cDNA
ATGGCTGTCCATGGCACCTACTCTACTCTTCGTAGCATATACCGTCGTCATCACCACCACCGCTATCAGCCATTTCTTTCATCGCACACATATCAAAACATCACAGGCTTCCAGTTTTATTTCCGTTATAATCGGCCATTGAGCACTAGCGCTGAGTCGGTTGAGCCGCCTGAATTGTCCGGTAGGAACGCTTACGACCTCCTAGGGGTTGCTGAATCTTGCTCTTTTGCAGAAATTAAATCCTCTTTCCGGAAATTGGC...
1434 bp · LXL04_024376|LXL04_024376|OH1004|CDS
ATGGCTGTCCATGGCACCTACTCTACTCTTCGTAGCATATACCGTCGTCATCACCACCACCGCTATCAGCCATTTCTTTCATCGCACACATATCAAAACATCACAGGCTTCCAGTTTTATTTCCGTTATAATCGGCCATTGAGCACTAGCGCTGAGTCGGTTGAGCCGCCTGAATTGTCCGGTAGGAACGCTTACGACCTCCTAGGGGTTGCTGAATCTTGCTCTTTTGCAGAAATTAAATCCTCTTTCCGGAAATTGGC...
Protein
Download Protein FASTA477 aa · LXL04_024376|LXL04_024376|OH1004|PROTEIN
MAVHGTYSTLRSIYRRHHHHRYQPFLSSHTYQNITGFQFYFRYNRPLSTSAESVEPPELSGRNAYDLLGVAESCSFAEIKSSFRKLAKETHPDLSQSPDGISNPHRFVQILAAYEILSDTQKRVHYDSYLQSKKVFIRKPSTQGSAMYTYESYEATEHQMEVVEWLKWYRSAINDIVSQKTLANGTSYFDLLENDFYSAIHTAYHGPVINSMDFLPDCFEADERSVPETLEVLHLVSGRHLFGKVCISKRVPELQSHLSS...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_024376 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_024376 |
|---|---|
| Location | Chr05:88898320-88900022 (+) |
| Description | Similar to dnaJ: Chaperone protein DnaJ |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006260 DNA replication Biological Process GO:0006457 protein folding Biological Process GO:0009408 response to heat Biological Process GO:0016556 mRNA modification Biological Process GO:0032781 positive regulation of ATP-dependent activity Biological Process GO:0042026 protein refolding Biological Process GO:0051604 protein maturation Biological Process GO:0005615 extracellular space Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005788 endoplasmic reticulum lumen Cellular Component |
| KEGG gene cross-reference | gwc:GWCH70_2436 mmu:67838 rno:360734 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00226.37DnaJ63-127 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_024376 | PF00226.37 | DnaJ | 63 | 127 | 7.1e-18 | 65.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.