Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1243 bp · LXL04_020358|LXL04_020358|OH1004|cDNA
ATGACTCGGATAGCTCGCTATCCTCTCCGGTTCCAAAAAAAGCTCACTATCCTCTGCACGGATGCTGAGACGATTCCCTTGCACGCCTTCTCTGCACGCATGCTTCTCTGCACGCAAGCGTCAAATGGCGCGACGCCTTCTCCgatttccctctctatatttaccAAGATTTGAATTCAGAATTGAAAGGGAGAAATCAGAATTGAAAGGGACTTTCGGTGCCACCACCACCGCACCAAGATTAATTGCTATCGAAGATG...
1182 bp · LXL04_020358|LXL04_020358|OH1004|CDS
ATGCTGAGACGATTCCCTTGCACGCCTTCTCTGCACGCATGCTTCTCTGCACGCAAGCGTCAAATGGCGCGACGCCTTCTCCGATTTCCCTCTCTATATTTACCAAGATTTGAATTCAGAATTGAAAGGGAGAAATCAGAATTGAAAGGGACTTTCGGTGCCACCACCACCGCACCAAGATTAATTGCTATCGAAGATGTCTCAGATTCGATTGATGAGGTACAGGGCATGCATTCCGATGCTTCCACCTTAAGAAAAGC...
Protein
Download Protein FASTA393 aa · LXL04_020358|LXL04_020358|OH1004|PROTEIN
MLRRFPCTPSLHACFSARKRQMARRLLRFPSLYLPRFEFRIEREKSELKGTFGATTTAPRLIAIEDVSDSIDEVQGMHSDASTLRKASILREASRIKGNLVTIAHRLPYSSISFYAFERYKNVVDTKIVTCSREGSANIWTPKSRKSHVPIDMFQILFTSRKAKEWRRSPCVACCAGSSFDHKNESAISLYFQVVFAGYSAESLLQRIMDCKPKIVVTCNVVKRGKNVLNLKGYFRLFKYTDPRVPPPNVARIPPWRATH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_020358 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_020358 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr04:70074282-70082665 (-) | ||||||
| Description | Similar to ACS: Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0006083 acetate metabolic process Biological Process GO:0006085 acetyl-CoA biosynthetic process Biological Process GO:0006631 fatty acid metabolic process Biological Process GO:0019427 acetyl-CoA biosynthetic process from acetate Biological Process GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0009514 glyoxysome Cellular Component GO:0009536 plastid Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0003987 acetate-CoA ligase activity Molecular Function GO:0005524 ATP binding Molecular Function GO:0016208 AMP binding Molecular Function | ||||||
| KEGG gene cross-reference | ath:AT5G36880 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
B9DGD6 | Arabidopsis thaliana | Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal | 60.000% | Swiss-Prot | weak database homology |