Gene Card
Gene overview
cDNA / CDS / Protein Sequences
477 bp · LXL04_010742|LXL04_010742|OH1004|cDNA
ATGGCTGGATTGATGGATAAAGCAAAAGATTTCGTGGCGGAGAAGGTGGCGAACATGAAGAAACCGGAGGCGACGGTGAAGAACGTTGATCTCAAAGAAGTCAGCTGTCAATGCATAACCTACAAGGCCGACGTCAACGTTTCCAATCCTTACAGCACCTCTATTCCGATCTGCGAGATCTCTTATACCTTCAAAAGTGCCGACAGGGTGATAGCTGAAGGCTCTATCCCAGACCCTGGATCGCTAAAAGCTAACGCCGA...
477 bp · LXL04_010742|LXL04_010742|OH1004|CDS
ATGGCTGGATTGATGGATAAAGCAAAAGATTTCGTGGCGGAGAAGGTGGCGAACATGAAGAAACCGGAGGCGACGGTGAAGAACGTTGATCTCAAAGAAGTCAGCTGTCAATGCATAACCTACAAGGCCGACGTCAACGTTTCCAATCCTTACAGCACCTCTATTCCGATCTGCGAGATCTCTTATACCTTCAAAAGTGCCGACAGGGTGATAGCTGAAGGCTCTATCCCAGACCCTGGATCGCTAAAAGCTAACGCCGA...
Protein
Download Protein FASTA158 aa · LXL04_010742|LXL04_010742|OH1004|PROTEIN
MAGLMDKAKDFVAEKVANMKKPEATVKNVDLKEVSCQCITYKADVNVSNPYSTSIPICEISYTFKSADRVIAEGSIPDPGSLKANADTMLDVGVKVPHSVLMSLMRDIGADWDIDYELNIILTVDLPVVGNINIPVNSKGEIKLPTMSSLMGLGSATT
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_010742 |
|---|---|
| TK1151 ID | TkA03G545990 |
| OH-1004 ID | LXL04_010742 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_010742 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:152477929-152478683 (+) | |||||||||
| Description | Similar to LEA14-A: Late embryogenesis abundant protein Lea14-A | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009269 response to desiccation Biological Process GO:0009611 response to wounding Biological Process GO:0009644 response to high light intensity Biological Process GO:0050832 defense response to fungus Biological Process GO:0071465 cellular response to desiccation Biological Process GO:1902075 cellular response to salt Biological Process GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G01470 ath:AT2G46140 ghi:107922715 gmx:547837 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03168.20LEA_245-140 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_010742 | PF03168.20 | LEA_2 | 45 | 140 | 1.1e-21 | 77.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.