Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1254 bp · LXL04_009597|LXL04_009597|OH1004|cDNA
ATGGGGATGATGAGCTCAGATGAGAAATCTGTTGCTGTGATCATGGTTGGTGGTCCTACAAAAGGAACTCGTTTCAGGCCATTGTCACTGAATATTCCAAAGCCACTTTTTCCCCTAGCAGGACAGGCAATGGTTCATCATCCAATCTCTGCCTGTAAAAAGATACCAAACCTAGCACAGATCTATCTTGTTGGTTTCTACGAAGAGCGTGAGTTTGCCTTATATGTATCTTCCATCTCTAATGAGCTCAAAGTCCCTGT...
1254 bp · LXL04_009597|LXL04_009597|OH1004|CDS
ATGGGGATGATGAGCTCAGATGAGAAATCTGTTGCTGTGATCATGGTTGGTGGTCCTACAAAAGGAACTCGTTTCAGGCCATTGTCACTGAATATTCCAAAGCCACTTTTTCCCCTAGCAGGACAGGCAATGGTTCATCATCCAATCTCTGCCTGTAAAAAGATACCAAACCTAGCACAGATCTATCTTGTTGGTTTCTACGAAGAGCGTGAGTTTGCCTTATATGTATCTTCCATCTCTAATGAGCTCAAAGTCCCTGT...
Protein
Download Protein FASTA417 aa · LXL04_009597|LXL04_009597|OH1004|PROTEIN
MGMMSSDEKSVAVIMVGGPTKGTRFRPLSLNIPKPLFPLAGQAMVHHPISACKKIPNLAQIYLVGFYEEREFALYVSSISNELKVPVKYLKEDKPHGSAGGLYNFRDLILEDNPSHIFLLNCDVCCTFPLPEMLEAHKRYGGMGTILVIKVSPESADQFGELVADSETNELLHYTEKPETFVSDRINCGVYVFTPEIFTAIQNVSTERKDRANLRRQSSFEALQSATRSLPANFVRLDQDILSPLAGKKQLYIYETRDFW...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_009597 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_009597 |
|---|---|
| Location | Chr02:129434811-129437572 (+) |
| Description | Similar to gmppA: Mannose-1-phosphate guanyltransferase alpha |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009298 GDP-mannose biosynthetic process Biological Process GO:0005737 cytoplasm Cellular Component GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity Molecular Function GO:0005525 GTP binding Molecular Function GO:0016740 transferase activity Molecular Function GO:0016779 nucleotidyltransferase activity Molecular Function |
| KEGG gene cross-reference | ddi:DDB_G0271858 dre:393469 xla:444472 xtr:779654 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00483.30NTP_transferase12-221 aaPF25084.2LbH_EIF2B295-370 aaPF25087.2GMPPB_C299-416 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_009597 | PF00483.30 | NTP_transferase | 12 | 221 | 1.2e-31 | 110.9 |
| LXL04_009597 | PF25084.2 | LbH_EIF2B | 295 | 370 | 8.7e-07 | 29.6 |
| LXL04_009597 | PF25087.2 | GMPPB_C | 299 | 416 | 5.6e-37 | 126.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.