Gene Card
Gene overview
cDNA / CDS / Protein Sequences
540 bp · TkAUNG061820|TK1151|cDNA
ATGGATCAATCCACCAAAGCTGGAATCCGTCTAGCCGTTTGTACTTTATTGCTTATATCGTTATCTTTTATCTACATTTTATCAGAGAAAAACCCATCGGTTTCTATAACGACCTCCATAACTCAAAAGCTTTCTCCTTCTAAACTCTCATCATCCACGGATAAGTTAGATGATCTAGAAGCAGCATTGGAGGGAGCTTCCATGGCGGACAAAACCGTTATCATAGCCATCGTGAATAAAGCCTACACTGTAGGCGATAA...
540 bp · TkAUNG061820|TK1151|CDS
ATGGATCAATCCACCAAAGCTGGAATCCGTCTAGCCGTTTGTACTTTATTGCTTATATCGTTATCTTTTATCTACATTTTATCAGAGAAAAACCCATCGGTTTCTATAACGACCTCCATAACTCAAAAGCTTTCTCCTTCTAAACTCTCATCATCCACGGATAAGTTAGATGATCTAGAAGCAGCATTGGAGGGAGCTTCCATGGCGGACAAAACCGTTATCATAGCCATCGTGAATAAAGCCTACACTGTAGGCGATAA...
Protein
Download Protein FASTA179 aa · TkAUNG061820|TK1151|PROTEIN
MDQSTKAGIRLAVCTLLLISLSFIYILSEKNPSVSITTSITQKLSPSKLSSSTDKLDDLEAALEGASMADKTVIIAIVNKAYTVGDKPMLDIFLDGFWLGEDTRSLTNHLLLVAVDEAAFDRCKFLRLHCYMLKTDGGDFVGEKVYMSEEFIKMMWQRTRFLGDVLRRGYNFVFTVSIF
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkAUNG061820 |
|---|---|
| TK1151 ID | TkAUNG061820 |
| OH-1004 ID | LXL04_012105 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 93.100 |
| Protein coverage (%) | TK1151 97.765 / OH-1004 52.958Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkAUNG061820 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | ChrUn:17928680-17929258 (+) | |||||||||
| Description | Similar to At1g28695: Uncharacterized protein At1g28695 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0010265 SCF complex assembly Biological Process GO:0042546 cell wall biogenesis Biological Process GO:0043687 post-translational protein modification Biological Process GO:0071555 cell wall organization Biological Process GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0009507 chloroplast Cellular Component GO:0004381 fucosylgalactoside 3-alpha-galactosyltransferase activity Molecular Function GO:0016757 glycosyltransferase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G28695 ath:AT1G70630 ath:AT4G15970 ddi:DDB_G0283005 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03407Nucleotid_trans107-175 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkAUNG061820 | PF03407 | Nucleotid_trans | 107 | 175 | 5.2e-17 | 63.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.