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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG030270
Reference: TK1151 Chr: ChrUn Coordinates: 8145807-8149393 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2522 bp · TkAUNG030270|TK1151|cDNA

CTGATTTCTTGATTCACCCCCAAATGTTCACTCGGTTCACCCGCCATTCCACCCCGCCATTCCTCCCGCGTGCTCTCTCAGTCCGATACCTCCTCACGCGTGCTCTCGGATTCCGATGGCGCGATACCTCCTTCCTCACGCGGGTATCTTCATAGGTAACAGGTTTGTGGTGCGATTTCCCTCTCCATATTTAACCTCCCGTAGTTCACTCGAGGCTGTAGAGAAATCAGAACGATTCCAATCGTCTGCCTGATCTCAAT...

CDS

Download CDS FASTA

354 bp · TkAUNG030270|TK1151|CDS

ATGATGGCCTCCAATGAGCTCAAAACTCATGCTTTCCTTCAATGGCTTGCATTTAGAAATGATGGCAAATACTGTGCTGCAGACTATGCTAAAGCTTCAAGTGAGAAACTTTCAAAGAATCTTGCACTTGGAGATCAAAGATTTTGGAATCCATTCGAACAACAACAATATATTAAACGAAAAAGATCTTTTATAATTAACTGGTCTCAGATCGCATCAGCTGAATCGGAAGACGAGCTTCAACAACAGCAAACCGCCAT...

Protein

Download Protein FASTA

117 aa · TkAUNG030270|TK1151|PROTEIN

MMASNELKTHAFLQWLAFRNDGKYCAADYAKASSEKLSKNLALGDQRFWNPFEQQQYIKRKRSFIINWSQIASAESEDELQQQQTAIVTYTKTAYKPCCFLQMYQFNFFSYLIEMVY

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG030270
TK1151 IDTkAUNG030270
OH-1004 IDLXL04_011193
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)86.500
Protein coverage (%)TK1151 31.624 / OH-1004 11.635
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG030270
LocationChrUn:8145807-8149393 (+)
DescriptionSimilar to HASPIN: Serine/threonine-protein kinase haspin homolog
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_011193 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000278 mitotic cell cycle Biological Process
GO:0006468 protein phosphorylation Biological Process
GO:0007064 mitotic sister chromatid cohesion Biological Process
GO:0007094 mitotic spindle assembly checkpoint signaling Biological Process
GO:0010467 gene expression Biological Process
GO:0035556 intracellular signal transduction Biological Process
GO:0043687 post-translational protein modification Biological Process
GO:0045143 homologous chromosome segregation Biological Process
GO:0070192 chromosome organization involved in meiotic cell cycle Biological Process
GO:0071459 protein localization to chromosome, centromeric region Biological Process
GO:2000134 negative regulation of G1/S transition of mitotic cell cycle Biological Process
GO:0005634 nucleus Cellular Component
KEGG gene cross-reference
ath:AT1G09450
bta:767819
hsa:83903
mmu:14841
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.426
Rank 1 · TkAUNG030270 · TK1151
Cytoplasm0.392
Rank 2 · TkAUNG030270 · TK1151
Mitochondrion0.194
Rank 3 · TkAUNG030270 · TK1151
Cell membrane0.063
Rank 4 · TkAUNG030270 · TK1151
Endoplasmic reticulum0.051
Rank 5 · TkAUNG030270 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

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