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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG027410
Reference: TK1151 Chr: ChrUn Coordinates: 7326172-7329399 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2208 bp · TkAUNG027410|TK1151|cDNA

ATGGCAAAATTGTTGCATTTGTTTATGTTGACACTTATGCTATATGCTCTTCAATCTACCTTGGCAACTAAGTTTTCATCTTCAAGTCGGTCATTAAGCCATGAAGATGAGTGCTCTATGTTATTCCAGTTCAAAAAGAACATTCCCATAAACCCTGATGCATCCTTTGATCTTCGTGCTTATCCAAAGACTGCTTCATGGAATCTCAATGAGAGTGATTGTTGTTTATGGGATGGGGTTGAATGCATTGGGAAAAACTC...

CDS

Download CDS FASTA

2208 bp · TkAUNG027410|TK1151|CDS

ATGGCAAAATTGTTGCATTTGTTTATGTTGACACTTATGCTATATGCTCTTCAATCTACCTTGGCAACTAAGTTTTCATCTTCAAGTCGGTCATTAAGCCATGAAGATGAGTGCTCTATGTTATTCCAGTTCAAAAAGAACATTCCCATAAACCCTGATGCATCCTTTGATCTTCGTGCTTATCCAAAGACTGCTTCATGGAATCTCAATGAGAGTGATTGTTGTTTATGGGATGGGGTTGAATGCATTGGGAAAAACTC...

Protein

Download Protein FASTA

735 aa · TkAUNG027410|TK1151|PROTEIN

MAKLLHLFMLTLMLYALQSTLATKFSSSSRSLSHEDECSMLFQFKKNIPINPDASFDLRAYPKTASWNLNESDCCLWDGVECIGKNSGHVIGLDLSSSFLSGPINSNNSLFSLIHLQTLKLSDNDFQLSQIPSGISRLLNLQTLNLSDSIFSGQVPNEISHLSQLISLDLTGNLLKLQSRIFRNLVQNTTYTLRELFLSGVNIDSEIPDILVNSTSSLLSLVMRDCNLTGEFPQGIGKLPNLLYLDLRLNNLSCEIPASI...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG027410
TK1151 IDTkAUNG027410
OH-1004 IDLXL04_037905
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)55.100
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG027410
LocationChrUn:7326172-7329399 (-)
DescriptionSimilar to RLP34: Receptor-like protein 34
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_037905 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0007165 signal transduction Biological Process
GO:0009791 post-embryonic development Biological Process
GO:0051707 response to other organism Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-reference
ath:AT1G47890
ath:AT3G11010
ath:AT3G11080
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.843
Rank 1 · TkAUNG027410 · TK1151
Endoplasmic reticulum0.105
Rank 2 · TkAUNG027410 · TK1151
Cytoplasm0.059
Rank 3 · TkAUNG027410 · TK1151
Nucleus0.040
Rank 4 · TkAUNG027410 · TK1151
Lysosome / Vacuole0.030
Rank 5 · TkAUNG027410 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF08263LRRNT_235-82 aa
PF24048LRR_NXF1-561-98 aa
PF13855LRR_890-125 aa
PF00560LRR_193-105 aa
PF29594LRR_SKP295-217 aa
PF12799LRR_4103-126 aa
PF25013LRR_Zer-1112-174 aa
PF00560LRR_1115-138 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG027410PF08263LRRNT_235825.2e-0627.3
TkAUNG027410PF24048LRR_NXF1-561983.97.8
TkAUNG027410PF13855LRR_8901252.1e-36124.2
TkAUNG027410PF00560LRR_1931051.9e-41131.8
TkAUNG027410PF29594LRR_SKP2952170.09212.7
TkAUNG027410PF12799LRR_41031266.6e-2587.3
TkAUNG027410PF25013LRR_Zer-11121740.0002821.8
TkAUNG027410PF00560LRR_11151381.9e-41131.8
TkAUNG027410PF13855LRR_81151752.1e-36124.2
TkAUNG027410PF12799LRR_41151496.6e-2587.3
TkAUNG027410PF24048LRR_NXF1-51151503.97.8
TkAUNG027410PF25019LRR_R13L1-DRL211241710.001918.8
TkAUNG027410PF23286LRR_131292000.001119.5
TkAUNG027410PF00560LRR_11401621.9e-41131.8
TkAUNG027410PF12799LRR_41401756.6e-2587.3
TkAUNG027410PF03461TRCF1531750.04214.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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