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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG003510
Reference: TK1151 Chr: ChrUn Coordinates: 1064235-1068829 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3174 bp · TkAUNG003510|TK1151|cDNA

GAAAAGGTATGCCAGACAGGTGGATGATCACCGGAGACTGAGATATGTATGGAGAACTAAACAAAAATCAAAATTTTCACGAGGTTAGGGTTTTGATTTTTGCGAGGAAGAAGAAGAAAGATGACGCTCTTGAAAGGAGCATGGGTAGGTGGAGTAAGATTCGGCGTAGGTGGCAGTGGCGCTGGTGTGGGGATGGGGGATGATTCCGGTGAGTTCGATTCTATTTCAAGAGACGAACATCTCTCCTCCGTCCACAGCAT...

CDS

Download CDS FASTA

2643 bp · TkAUNG003510|TK1151|CDS

ATGACGCTCTTGAAAGGAGCATGGGTAGGTGGAGTAAGATTCGGCGTAGGTGGCAGTGGCGCTGGTGTGGGGATGGGGGATGATTCCGGTGAGTTCGATTCTATTTCAAGAGACGAACATCTCTCCTCCGTCCACAGCATCCGTAGCGGTATTCTTCCGTCGCTCGGTTCTCAATCGACTCGGAGCGTCAAGCTACGTCCCTTCACCATCAACCCCTTACATCACCGTTACAGACTTTGGCAGGTGTTTCTAGTTGTGCT...

Protein

Download Protein FASTA

880 aa · TkAUNG003510|TK1151|PROTEIN

MTLLKGAWVGGVRFGVGGSGAGVGMGDDSGEFDSISRDEHLSSVHSIRSGILPSLGSQSTRSVKLRPFTINPLHHRYRLWQVFLVVLVFYTAWVSPFEFGFLDSPARLLSIADNVVNAFFFFDIVLTFFVAYLDKVSYLLIDDRNRIAWRYLTTWFVFDVISTIPSEIGRKMFPSSLQPYGYFNMLRLWRLRRVGDLFGRLEKDRNFNYFWVRVARLVSVTLFSVHLSACCLYLIAHRYDDQSATWLALDASAARESIPR...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG003510
TK1151 IDTkAUNG003510
OH-1004 IDLXL04_015578
Relationship / confidenceRbh Sequence Supported / Probable
Protein identity (%)98.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG003510
LocationChrUn:1064235-1068829 (-)
DescriptionSimilar to AKT1: Potassium channel AKT1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g26650 May act as a highly selective inward-rectifying potassium channel mediating root potassium uptake under low K⁺ conditions.
Regulated expression of Arabidopsis shaker K+ channel genes involved in K+ uptake and distribution in the plant.2003 · DOI: 10.1023/a:1022597102282
A protein kinase, interacting with two calcineurin B-like proteins, regulates K+ transporter AKT1 in Arabidopsis.2006 · DOI: 10.1016/j.cell.2006.06.011
A Ca(2)+ signaling pathway regulates a K(+) channel for low-K response in Arabidopsis.2006 · DOI: 10.1073/pnas.0605129103
A protein phosphorylation/dephosphorylation network regulates a plant potassium channel.2007 · DOI: 10.1073/pnas.0707912104
High-affinity K(+) transport in Arabidopsis: AtHAK5 and AKT1 are vital for seedling establishment and postgermination growth under low-potassium conditions.2010 · DOI: 10.1104/pp.110.154369
A role for the AKT1 potassium channel in plant nutrition.1998 · DOI: 10.1126/science.280.5365.918
At2g25600 Highly selective inward-rectifying potassium channel that could mediate potassium uptake in the pollen membrane.
Pollen tube development and competitive ability are impaired by disruption of a Shaker K(+) channel in Arabidopsis.2002 · DOI: 10.1101/gad.213902
At4g32500 Probable potassium channel. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: P0C550 Highly selective inward-rectifying potassium channel that mediates potassium uptake by plant roots. No verified direct reference in this release
Os01g0648000 Highly selective inward-rectifying potassium channel that mediates potassium uptake by plant roots.
Rice K+ uptake channel OsAKT1 is sensitive to salt stress.2005 · DOI: 10.1007/s00425-004-1437-9
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015578 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006813 potassium ion transport Biological Process
GO:0009414 response to water deprivation Biological Process
GO:0009651 response to salt stress Biological Process
GO:0009860 pollen tube growth Biological Process
GO:0048767 root hair elongation Biological Process
GO:0090333 regulation of stomatal closure Biological Process
GO:1990573 potassium ion import across plasma membrane Biological Process
GO:0005886 plasma membrane Cellular Component
GO:0034702 monoatomic ion channel complex Cellular Component
GO:0005242 inward rectifier potassium channel activity Molecular Function
GO:0005249 voltage-gated potassium channel activity Molecular Function
GO:0005267 potassium channel activity Molecular Function
KEGG gene cross-reference
ath:AT2G25600
ath:AT2G26650
ath:AT4G32500
dosa:Os01g0648000
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.555
Rank 1 · TkAUNG003510 · TK1151
Cytoplasm0.180
Rank 2 · TkAUNG003510 · TK1151
Endoplasmic reticulum0.155
Rank 3 · TkAUNG003510 · TK1151
Lysosome / Vacuole0.103
Rank 4 · TkAUNG003510 · TK1151
Golgi apparatus0.097
Rank 5 · TkAUNG003510 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00520Ion_trans77-320 aa
PF07885Ion_trans_2135-164 aa
PF12796Ank_2230-248 aa
PF13637Ank_4230-257 aa
PF07885Ion_trans_2262-315 aa
PF00027cNMP_binding414-499 aa
PF23745ANK_LRRK2539-569 aa
PF13857Ank_5543-572 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG003510PF00520Ion_trans773203e-37128.8
TkAUNG003510PF07885Ion_trans_21351649.6e-1142.1
TkAUNG003510PF12796Ank_22302487.5e-2794.5
TkAUNG003510PF13637Ank_42302577.7e-1761.7
TkAUNG003510PF07885Ion_trans_22623159.6e-1142.1
TkAUNG003510PF00027cNMP_binding4144991.6e-1557.5
TkAUNG003510PF23745ANK_LRRK25395690.02815.0
TkAUNG003510PF13857Ank_55435726.1e-2071.8
TkAUNG003510PF12796Ank_25446347.5e-2794.5
TkAUNG003510PF00023Ank5445692.4e-1865.9
TkAUNG003510PF13637Ank_45445947.7e-1761.7
TkAUNG003510PF13606Ank_35475682.9e-1349.3
TkAUNG003510PF13857Ank_55596116.1e-2071.8
TkAUNG003510PF00023Ank5746042.4e-1865.9
TkAUNG003510PF13606Ank_35746012.9e-1349.3
TkAUNG003510PF13637Ank_45816277.7e-1761.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q38998Arabidopsis thalianasp|Q38998|AKT1_ARATH Potassium channel AKT155.400%Swiss-ProtHigh
Q8GXE6Arabidopsis thalianasp|Q8GXE6|AKT6_ARATH Potassium channel AKT653.100%Swiss-ProtHigh
Q9SCX5Arabidopsis thalianasp|Q9SCX5|AKT5_ARATH Probable potassium channel AKT551.300%Swiss-ProtHigh
P0C550Oryza sativa subsp. indicasp|P0C550|AKT1_ORYSI Potassium channel AKT151.300%Swiss-ProtHigh
Q0JKV1Oryza sativa subsp. japonicasp|Q0JKV1|AKT1_ORYSJ Potassium channel AKT151.300%Swiss-ProtHigh

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