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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G431140
Reference: TK1151 Chr: Chr08 Coordinates: 109609381-109610404 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

834 bp · TkA08G431140|TK1151|cDNA

ATGGCTGATGATGATACAAAAGAAGCCTTACTTGCAAATCAAAACCAACCTCTTTTTTACCCACCACCAATTTCCACGGACCATTTTAACTTAAAGCAAGTGGCGATTATCTTGGCTGCTTACCTAACCCTAGGCACCTTGTGTTTTTCCCTCATCCAAGATGAAATCAGTGGCACGAAAACCAACAAAATCCTAGATTCCGTCTATTTCTGTGTCATCACAATGACGGCTGCAGGATACGGTGATGTAGGACCCGAAAC...

CDS

Download CDS FASTA

834 bp · TkA08G431140|TK1151|CDS

ATGGCTGATGATGATACAAAAGAAGCCTTACTTGCAAATCAAAACCAACCTCTTTTTTACCCACCACCAATTTCCACGGACCATTTTAACTTAAAGCAAGTGGCGATTATCTTGGCTGCTTACCTAACCCTAGGCACCTTGTGTTTTTCCCTCATCCAAGATGAAATCAGTGGCACGAAAACCAACAAAATCCTAGATTCCGTCTATTTCTGTGTCATCACAATGACGGCTGCAGGATACGGTGATGTAGGACCCGAAAC...

Protein

Download Protein FASTA

277 aa · TkA08G431140|TK1151|PROTEIN

MADDDTKEALLANQNQPLFYPPPISTDHFNLKQVAIILAAYLTLGTLCFSLIQDEISGTKTNKILDSVYFCVITMTAAGYGDVGPETKLAKSLACIFVFTGMALGGFALSKAADYIVGKQEILFVKAIHMHETYGQNEIIKEAESNKVKYKFFTILTLIIFLMTVGTFFLSLVEQLSYFEAFYCLFVYLVELWTDNRRQMLVHWVINRKLTIQDLEKADLDDDKAVSAAEYIVYKLREMGKVSNEDIAIVVEGFKNLDVD...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G431140
TK1151 IDTkA08G431140
OH-1004 IDLXL04_034735
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)87.300
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G431140
LocationChr08:109609381-109610404 (+)
DescriptionSimilar to TPK1: Two-pore potassium channel 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g55630 Voltage-independent, large conductance and potassium- selective tonoplast ion channel.
TPK1 is a vacuolar ion channel different from the slow-vacuolar cation channel.2005 · DOI: 10.1104/pp.105.065599
TPK1, a Ca(2+)-regulated Arabidopsis vacuole two-pore K(+) channel is activated by 14-3-3 proteins.2007 · DOI: 10.1111/j.1365-313x.2007.03255.x
At1g02510 Voltage-independent, instantaneously activating, potassium-selective plasma membrane ion channel. No verified direct reference in this release
At4g18160 Two-pore potassium channel modulating the proton motive force (pmf) necessary to convert photochemical energy into physiological functions. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0752300 Highly selective inward-rectifying potassium channel that is specifically located in the tonoplast of large vacuoles.
Rice two-pore K+ channels are expressed in different types of vacuoles.2011 · DOI: 10.1105/tpc.110.081463
Os07g0108800 Highly selective inward-rectifying potassium channel that is specifically located in the tonoplast of protein storage vacuoles.
Rice two-pore K+ channels are expressed in different types of vacuoles.2011 · DOI: 10.1105/tpc.110.081463
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_034735 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0010029 regulation of seed germination Biological Process
GO:0010119 regulation of stomatal movement Biological Process
GO:0030007 intracellular potassium ion homeostasis Biological Process
GO:0071257 cellular response to electrical stimulus Biological Process
GO:0071805 potassium ion transmembrane transport Biological Process
GO:0097623 potassium ion export across plasma membrane Biological Process
GO:1990573 potassium ion import across plasma membrane Biological Process
GO:0005774 vacuolar membrane Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0009705 plant-type vacuole membrane Cellular Component
GO:0031004 potassium ion-transporting ATPase complex Cellular Component
KEGG gene cross-reference
ath:AT4G01840
ath:AT5G55630
dosa:Os03g0752300
dosa:Os07g0108800
dosa:Os09g0299400
osa:4334137
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Lysosome / Vacuole0.357
Rank 1 · TkA08G431140 · TK1151
Cell membrane0.340
Rank 2 · TkA08G431140 · TK1151
Endoplasmic reticulum0.157
Rank 3 · TkA08G431140 · TK1151
Cytoplasm0.138
Rank 4 · TkA08G431140 · TK1151
Golgi apparatus0.103
Rank 5 · TkA08G431140 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF30185MRX9_TM29-50 aa
PF17332DUF559233-52 aa
PF20447DUF670433-85 aa
PF07885Ion_trans_236-116 aa
PF00520Ion_trans51-109 aa
PF09045L27_281-90 aa
PF17332DUF559287-110 aa
PF17332DUF559289-111 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G431140PF30185MRX9_TM29500.02515.4
TkA08G431140PF17332DUF559233520.07914.1
TkA08G431140PF20447DUF670433850.312.0
TkA08G431140PF07885Ion_trans_2361163.8e-1349.8
TkA08G431140PF00520Ion_trans511090.0004220.3
TkA08G431140PF09045L27_281900.2112.3
TkA08G431140PF17332DUF5592871100.07914.1
TkA08G431140PF17332DUF5592891110.07914.1
TkA08G431140PF03616Glt_symporter921900.000519.6
TkA08G431140PF30185MRX9_TM1301860.02515.4
TkA08G431140PF00520Ion_trans1351720.0004220.3
TkA08G431140PF17332DUF55921461930.07914.1
TkA08G431140PF20447DUF67041541700.312.0
TkA08G431140PF07885Ion_trans_21581883.8e-1349.8
TkA08G431140PF00520Ion_trans1771870.0004220.3
TkA08G431140PF13202EF-hand_52122230.04414.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8LBL1Arabidopsis thalianasp|Q8LBL1|KCO1_ARATH Two-pore potassium channel 143.000%Swiss-ProtMedium
Q9FWX6Arabidopsis thalianasp|Q9FWX6|KCO4_ARATH Two-pore potassium channel 425.900%Swiss-ProtLow
Q9SVV6Arabidopsis thalianasp|Q9SVV6|KCO6_ARATH Two-pore potassium channel 325.200%Swiss-ProtLow
Q850M0Oryza sativa subsp. japonicasp|Q850M0|KCO1_ORYSJ Two pore potassium channel a42.900%Swiss-ProtMedium
Q8LIN5Oryza sativa subsp. japonicasp|Q8LIN5|KCO2_ORYSJ Two pore potassium channel b41.400%Swiss-ProtMedium

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