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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G410310
Reference: TK1151 Chr: Chr08 Coordinates: 104417487-104418130 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

504 bp · TkA08G410310|TK1151|cDNA

CTCAAATCCCACTTTTATCGCCACTTCCCCTATCTCGGTTGTGTAAACCGTATCATCGCATCCCACATTAACTCCATTCCAATTCAATCTTGCACTCATTTTACCACCGACCACTTACTTCCTTTGGCAATGCCGCTTTCGACCTGCCACTTGCTATCCATCTCCATGGCCAGTTTCTTCTTCTCTCACCTATTGGGTTGTGGTTCTAATGCCGTCAGTCACCAGAGAGATCCCGTTGTACAATTCTCCGTTTCACAGTC...

CDS

Download CDS FASTA

504 bp · TkA08G410310|TK1151|CDS

CTCAAATCCCACTTTTATCGCCACTTCCCCTATCTCGGTTGTGTAAACCGTATCATCGCATCCCACATTAACTCCATTCCAATTCAATCTTGCACTCATTTTACCACCGACCACTTACTTCCTTTGGCAATGCCGCTTTCGACCTGCCACTTGCTATCCATCTCCATGGCCAGTTTCTTCTTCTCTCACCTATTGGGTTGTGGTTCTAATGCCGTCAGTCACCAGAGAGATCCCGTTGTACAATTCTCCGTTTCACAGTC...

Protein

Download Protein FASTA

168 aa · TkA08G410310|TK1151|PROTEIN

LKSHFYRHFPYLGCVNRIIASHINSIPIQSCTHFTTDHLLPLAMPLSTCHLLSISMASFFFSHLLGCGSNAVSHQRDPVVQFSVSQSTLFPNFPILPFISPPFVSLFSTTILLLLSISLRLYPQSSQPPVTPSIYSGVPLRFRPPPHRWHVLVSLNCFFLIYCVNRSK

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G410310
TK1151 IDTkA08G410310
OH-1004 IDLXL04_016327
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)59.000
Protein coverage (%)TK1151 23.214 / OH-1004 10.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G410310
LocationChr08:104417487-104418130 (-)
DescriptionSimilar to GPT1: Glucose-6-phosphate/phosphate translocator 1, chloroplastic
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_016327 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007033 vacuole organization Biological Process
GO:0009553 embryo sac development Biological Process
GO:0009624 response to nematode Biological Process
GO:0009643 photosynthetic acclimation Biological Process
GO:0009744 response to sucrose Biological Process
GO:0009749 response to glucose Biological Process
GO:0009793 embryo development ending in seed dormancy Biological Process
GO:0010109 regulation of photosynthesis Biological Process
GO:0010152 pollen maturation Biological Process
GO:0015713 phosphoglycerate transmembrane transport Biological Process
GO:0015714 phosphoenolpyruvate transport Biological Process
GO:0015718 monocarboxylic acid transport Biological Process
KEGG gene cross-reference
ath:AT1G61800
ath:AT4G03950
ath:AT5G17630
ath:AT5G54800
dosa:Os01g0239200
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.499
Rank 1 · TkA08G410310 · TK1151
Cytoplasm0.428
Rank 2 · TkA08G410310 · TK1151
Mitochondrion0.090
Rank 3 · TkA08G410310 · TK1151
Endoplasmic reticulum0.065
Rank 4 · TkA08G410310 · TK1151
Cell membrane0.051
Rank 5 · TkA08G410310 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

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