Gene Card
Gene overview
cDNA / CDS / Protein Sequences
345 bp · TkA08G257690|TK1151|cDNA
ATGGAGGCGGTGCGATTTCGGAGGAGCGGAGCAAGATGGAGAAGCGGCGCCGGCGATTTCGATCCGACGGGTGGTTCAGCAAGGTCCGATCGGGACGGGAGAGGAGAGATGGAACGACTAGGAGGAAAAAAAATGGCTAACCCTAAAATTTTAGGATTTTATATGGGTTATTTTATTTTTTATTTTTTTCTTAAACCTACGAGAAACGTCTTCCCGCCCGCAGACCTTGAACCACGTCTTCCCGCCCGCAGACGTTTTTA...
345 bp · TkA08G257690|TK1151|CDS
ATGGAGGCGGTGCGATTTCGGAGGAGCGGAGCAAGATGGAGAAGCGGCGCCGGCGATTTCGATCCGACGGGTGGTTCAGCAAGGTCCGATCGGGACGGGAGAGGAGAGATGGAACGACTAGGAGGAAAAAAAATGGCTAACCCTAAAATTTTAGGATTTTATATGGGTTATTTTATTTTTTATTTTTTTCTTAAACCTACGAGAAACGTCTTCCCGCCCGCAGACCTTGAACCACGTCTTCCCGCCCGCAGACGTTTTTA...
Protein
Download Protein FASTA114 aa · TkA08G257690|TK1151|PROTEIN
MEAVRFRRSGARWRSGAGDFDPTGGSARSDRDGRGEMERLGGKKMANPKILGFYMGYFIFYFFLKPTRNVFPPADLEPRLPARRRFYLCKPLLSSKKQTHFLTPQTLTSSRPQT
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G257690 |
|---|---|
| TK1151 ID | TkA08G257690 |
| OH-1004 ID | LXL04_027196 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 64.000 |
| Protein coverage (%) | TK1151 82.456 / OH-1004 15.398Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G257690 |
|---|---|
| Location | Chr08:67180402-67180746 (-) |
| Description | Similar to SCAMP1: Putative secretory carrier-associated membrane protein 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0015031 protein transport Biological Process GO:0005634 nucleus Cellular Component GO:0005768 endosome Cellular Component GO:0005769 early endosome Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0005802 trans-Golgi network Cellular Component GO:0005886 plasma membrane Cellular Component GO:0030658 transport vesicle membrane Cellular Component GO:0032588 trans-Golgi network membrane Cellular Component GO:0055038 recycling endosome membrane Cellular Component |
| KEGG gene cross-reference | ath:AT1G11180 ath:AT1G61250 dosa:Os03g0582200 dosa:Os07g0564600 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.