TkA08G252890 | RubberDandelionOmics

Gene overview

TkA08G252890

Reference: TK1151 Chr: Chr08 Coordinates: 66007043-66013882 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

1192 bp · TkA08G252890|TK1151|cDNA

TGTATATGGTGCACATGCATCTAATAATATTATATTCTGGTCACTCTCTCTCTCTCTATATATATATATAACAAGTGACGACTACTCATCCAGTATATCATACACACTTATCCAAACAAATCAAGATGGAAAGAGTAAGTGTGAAGGGTGAAATTAGCAAACCACATGTGGTGTTCATACCATTTCCAGCACAAAGCCACATCAAGTGTATGCTGAAACTAGCAAGGCTACTCCATCACAAGGGCATGGACATAACGTTT...

CDS

Download CDS FASTA

984 bp · TkA08G252890|TK1151|CDS

ATGGAAAGAGTAAGTGTGAAGGGTGAAATTAGCAAACCACATGTGGTGTTCATACCATTTCCAGCACAAAGCCACATCAAGTGTATGCTGAAACTAGCAAGGCTACTCCATCACAAGGGCATGGACATAACGTTTGTCAACAATGAGGTTAACCACAACAAGTTACTAAACTCTGGAGGCCCAAACAGCCACGATGATGAACCAGGGTTCCGGTTCAAGACCATTCCTGATGGTGTTCCCGAGGGTGCAACCGAGTACAT...

Protein

Download Protein FASTA

327 aa · TkA08G252890|TK1151|PROTEIN

MERVSVKGEISKPHVVFIPFPAQSHIKCMLKLARLLHHKGMDITFVNNEVNHNKLLNSGGPNSHDDEPGFRFKTIPDGVPEGATEYMTELCNSILTKFLAPFLDLMGRLDIESPVTCIIADGMMPFTIDAAEKLEVQIMHFWTFPACAFMAFYQAPVLIEKQLIPLKDENCLINGYLDTIIDWIPGLEGFRLKDLPGFTRTTNPHDVQYNLIIESTKATRKAPNIILHTFEELESTVIKALKPMIPHVYTIGPLELLLNP...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkA08G252890`
TK1151 ID	TkA08G252890
OH-1004 ID	LXL04_033761
Relationship / confidence	Multi Candidate From Tk1151 / Complex relationship
Protein identity (%)	74.500
Protein coverage (%)	TK1151 98.471 / OH-1004 60.878 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID TkA08G252890

Location Chr08:66007043-66013882 (+)

Description Similar to UGT85C1: UDP-glycosyltransferase 85C1

Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g22370`	UDP-glycosyltransferase 85A5.	No verified direct reference in this release
`At1g22340`	UDP-glycosyltransferase 85A7.	No verified direct reference in this release
`At1g78270`	UDP-glycosyltransferase 85A4.	No verified direct reference in this release
`At3g02100`	UDP-glycosyltransferase 83A1.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source

View annotation sources

Functional annotation source: OH1004 · LXL04_033761 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)

GO:0005737 cytoplasm Cellular Component

GO:0015020 glucuronosyltransferase activity Molecular Function

GO:0035251 UDP-glucosyltransferase activity Molecular Function

GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity Molecular Function

GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity Molecular Function

GO:0080043 quercetin 3-O-glucosyltransferase activity Molecular Function

GO:0080044 quercetin 7-O-glucosyltransferase activity Molecular Function

GO:0102377 steviol 13-O glucosyltransferase activity Molecular Function

GO:0102378 steviolmonoside glucosyltransferase activity Molecular Function

KEGG gene cross-reference

ag:BAK55737

ath:AT1G22380

ath:AT1G22400

These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.803

Rank 1 · TkA08G252890 · TK1151

Nucleus0.195

Rank 2 · TkA08G252890 · TK1151

Endoplasmic reticulum0.084

Rank 3 · TkA08G252890 · TK1151

Cell membrane0.050

Rank 4 · TkA08G252890 · TK1151

Peroxisome0.036

Rank 5 · TkA08G252890 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF26168Glyco_transf_N15-49 aa

PF26168Glyco_transf_N92-136 aa

PF26168Glyco_transf_N224-254 aa

Gene ID	Domain ID	Domain Name	Start aa	End aa	E-value	Score
TkA08G252890	`PF26168`	Glyco_transf_N	15	49	6.5e-07	30.2
TkA08G252890	`PF26168`	Glyco_transf_N	92	136	6.5e-07	30.2
TkA08G252890	`PF26168`	Glyco_transf_N	224	254	6.5e-07	30.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

Protein	Organism	Description	Identity	Database	Confidence
`Q9LMF0`	Arabidopsis thaliana	sp\|Q9LMF0\|U85A5_ARATH UDP-glycosyltransferase 85A5	46.900%	Swiss-Prot	Medium
`Q9LME8`	Arabidopsis thaliana	sp\|Q9LME8\|U85A7_ARATH UDP-glycosyltransferase 85A7	46.300%	Swiss-Prot	Medium
`Q9M9E7`	Arabidopsis thaliana	sp\|Q9M9E7\|U85A4_ARATH UDP-glycosyltransferase 85A4	45.200%	Swiss-Prot	Medium
`Q9SGA8`	Arabidopsis thaliana	sp\|Q9SGA8\|U83A1_ARATH UDP-glycosyltransferase 83A1	38.500%	Swiss-Prot	Medium

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