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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G171020
Reference: TK1151 Chr: Chr08 Coordinates: 44753084-44756899 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2475 bp · TkA08G171020|TK1151|cDNA

ATGTCTTCTTCATCTTCCTACAAACAGCTCGATCACTTACGAATCCCACTAGAAGCGATAGTATCCGCCACTGACAACTTTTCTGATGCAAACCTCATCGGAGAAGATGGTTTTGGAAAGGAGTACAAAGGTCAACTATTGCTGTCGTCCGGTCAATCGATTGATATCGTTGCACGGAGGGTAAATCAACAGATGTATGGAAAAGGAAACAAAGAGTTTTGGATGGAGATTTGGACGCTTTCGAAACTCAAGCATAAAAA...

CDS

Download CDS FASTA

2475 bp · TkA08G171020|TK1151|CDS

ATGTCTTCTTCATCTTCCTACAAACAGCTCGATCACTTACGAATCCCACTAGAAGCGATAGTATCCGCCACTGACAACTTTTCTGATGCAAACCTCATCGGAGAAGATGGTTTTGGAAAGGAGTACAAAGGTCAACTATTGCTGTCGTCCGGTCAATCGATTGATATCGTTGCACGGAGGGTAAATCAACAGATGTATGGAAAAGGAAACAAAGAGTTTTGGATGGAGATTTGGACGCTTTCGAAACTCAAGCATAAAAA...

Protein

Download Protein FASTA

824 aa · TkA08G171020|TK1151|PROTEIN

MSSSSSYKQLDHLRIPLEAIVSATDNFSDANLIGEDGFGKEYKGQLLLSSGQSIDIVARRVNQQMYGKGNKEFWMEIWTLSKLKHKNIVSIVGRPALTWIQRLQICVGVAHALSYIYYDNQRDFSVIHRDIKSSKILLDDKWEAKLSGFELSITQTAARRNRLFLTNTCGTPGYCDATYIESGSVTHKSDMYSFGMVLFEVLSGKEAITEDKNNILLASSARSHYEGGKVEDMIDPVLWKEMNTKSFEIFSDTAYYCLKK...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G171020
TK1151 IDTkA08G171020
OH-1004 IDLXL04_032398
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)87.200
Protein coverage (%)TK1151 98.786 / OH-1004 60.302
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G171020
LocationChr08:44753084-44756899 (+)
DescriptionSimilar to At5g24010: Probable receptor-like protein kinase At5g24010
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g51550 May regulate MLO7 polarization in female gametophyte synergid cells to control pollen tube growth and male gamete delivery during fertilization.
FERONIA receptor-like kinase regulates RHO GTPase signaling of root hair development.2010 · DOI: 10.1073/pnas.1005366107
At5g59700 Probable receptor-like protein kinase At5g59700. No verified direct reference in this release
At3g46290 Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner.
Three related receptor-like kinases are required for optimal cell elongation in Arabidopsis thaliana.2009 · DOI: 10.1073/pnas.0812346106
At5g28680 Receptor-like protein kinase that controls pollen tube behavior by directing rupture at proper timing to release the sperm cell. No verified direct reference in this release
At2g21480 Probable receptor-like protein kinase At2g21480. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032398 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009723 response to ethylene Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0009741 response to brassinosteroid Biological Process
GO:0009742 brassinosteroid mediated signaling pathway Biological Process
GO:0009788 negative regulation of abscisic acid-activated signaling pathway Biological Process
GO:0009791 post-embryonic development Biological Process
GO:0009873 ethylene-activated signaling pathway Biological Process
GO:0010118 stomatal movement Biological Process
GO:0010483 pollen tube reception Biological Process
GO:0030308 negative regulation of cell growth Biological Process
GO:0032922 circadian regulation of gene expression Biological Process
GO:0046777 protein autophosphorylation Biological Process
KEGG gene cross-reference
ath:AT3G51550
ath:AT5G24010
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.533
Rank 1 · TkA08G171020 · TK1151
Cytoplasm0.383
Rank 2 · TkA08G171020 · TK1151
Nucleus0.214
Rank 3 · TkA08G171020 · TK1151
Endoplasmic reticulum0.043
Rank 4 · TkA08G171020 · TK1151
Golgi apparatus0.036
Rank 5 · TkA08G171020 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF07714PK_Tyr_Ser-Thr32-93 aa
PF00069Pkinase32-92 aa
PF07714PK_Tyr_Ser-Thr96-275 aa
PF29500SMIM296-112 aa
PF00069Pkinase104-272 aa
PF12330Haspin_kinase104-154 aa
PF01636APH121-142 aa
PF12363Phage_TAC_12240-278 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G171020PF07714PK_Tyr_Ser-Thr32931.7e-92310.1
TkA08G171020PF00069Pkinase32926e-88295.4
TkA08G171020PF07714PK_Tyr_Ser-Thr962751.7e-92310.1
TkA08G171020PF29500SMIM2961120.06314.1
TkA08G171020PF00069Pkinase1042726e-88295.4
TkA08G171020PF12330Haspin_kinase1041540.0003920.3
TkA08G171020PF01636APH1211420.07113.6
TkA08G171020PF12363Phage_TAC_122402780.06814.4
TkA08G171020PF03109ABC12612870.0009719.1
TkA08G171020PF07714PK_Tyr_Ser-Thr3275721.7e-92310.1
TkA08G171020PF00069Pkinase3626286e-88295.4
TkA08G171020PF01738DLH3644060.2911.4
TkA08G171020PF29500SMIM24364690.06314.1
TkA08G171020PF12330Haspin_kinase4375080.0003920.3
TkA08G171020PF15942DUF47514384920.1113.2
TkA08G171020PF01636APH4614830.07113.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9SCZ4Arabidopsis thalianasp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA35.700%Swiss-ProtLow
Q9FN92Arabidopsis thalianasp|Q9FN92|Y5597_ARATH Probable receptor-like protein kinase At5g5970039.600%Swiss-ProtLow
Q9LX66Arabidopsis thalianasp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 137.600%Swiss-ProtLow
Q3E8W4Arabidopsis thalianasp|Q3E8W4|ANX2_ARATH Receptor-like protein kinase ANXUR237.700%Swiss-ProtLow
Q9SJT0Arabidopsis thalianasp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase At2g2148039.200%Swiss-ProtLow

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