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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G156180
Reference: TK1151 Chr: Chr08 Coordinates: 40737476-40740680 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1988 bp · TkA08G156180|TK1151|cDNA

CCTCTATATAATATATACCTTAATCTAAGGCTTCCTAAACATCACAGTAGAGCAACTTACCTCGTATCATAAAACATGCCTGCAGTTCAACAAGTTGTCATCCGACCCACTGTTAATTTCCCTCTTAGTGTTTGGGGAGATCAGTTTGTTGCCTATGAACAGGAACACAAAGATGCAGTAGATTATAAGGTAGTTGATGATTTAAAAGACAAAGTGAGGAAAGAACTATTGGAGTGTTTGAATGATCCGAGTGAACATTT...

CDS

Download CDS FASTA

1626 bp · TkA08G156180|TK1151|CDS

ATGCCTGCAGTTCAACAAGTTGTCATCCGACCCACTGTTAATTTCCCTCTTAGTGTTTGGGGAGATCAGTTTGTTGCCTATGAACAGGAACACAAAGATGCAGTAGATTATAAGGTAGTTGATGATTTAAAAGACAAAGTGAGGAAAGAACTATTGGAGTGTTTGAATGATCCGAGTGAACATTTAAATTTGTTAAAACTTGTTGATGCAATCCAACGTCTCGGCATACCATATTACTTTGAGGAGGAGATTAATGAAGG...

Protein

Download Protein FASTA

541 aa · TkA08G156180|TK1151|PROTEIN

MPAVQQVVIRPTVNFPLSVWGDQFVAYEQEHKDAVDYKVVDDLKDKVRKELLECLNDPSEHLNLLKLVDAIQRLGIPYYFEEEINEGLQHIYDAHGDNWTGAGTSLWFRIMRQQGFLVSSDIFHGYKNKEGAFNESLENDVQELLELYEATYLSMPGEVILDDALHFTKNRLHEIAKESNSTQIHDALKQPLHKRLPRLEAVRYIPFYESQPSHNQSLLKLAKVGFSVLQSLHKKELSEISKWWKTFDVPNNLPYARNRL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G156180
TK1151 IDTkA08G156180
OH-1004 IDLXL04_032187
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G156180
LocationChr08:40737476-40740680 (-)
DescriptionSimilar to Alpha-isocomene synthase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032187 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0016102 diterpenoid biosynthetic process Biological Process
GO:0051762 sesquiterpene biosynthetic process Biological Process
GO:0000287 magnesium ion binding Molecular Function
GO:0010333 terpene synthase activity Molecular Function
GO:0052682 epi-cedrol synthase activity Molecular Function
GO:0080016 (-)-E-beta-caryophyllene synthase activity Molecular Function
KEGG gene cross-reference
ag:AAF80333
ag:AAL79181
ag:AFM43735
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.779
Rank 1 · TkA08G156180 · TK1151
Nucleus0.181
Rank 2 · TkA08G156180 · TK1151
Plastid0.126
Rank 3 · TkA08G156180 · TK1151
Endoplasmic reticulum0.070
Rank 4 · TkA08G156180 · TK1151
Cell membrane0.049
Rank 5 · TkA08G156180 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF20722DUF68307-29 aa
PF01397Terpene_synth19-185 aa
PF02881SRP54_N35-63 aa
PF08730Rad3338-94 aa
PF22306PAV1-137_bromodom-like38-53 aa
PF05424Duffy_binding117-151 aa
PF29248TP0900_4th205-249 aa
PF03936Terpene_synth_C247-484 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G156180PF20722DUF68307290.112.5
TkA08G156180PF01397Terpene_synth191851.2e-43149.7
TkA08G156180PF02881SRP54_N35630.1513.0
TkA08G156180PF08730Rad3338940.005517.4
TkA08G156180PF22306PAV1-137_bromodom-like38530.03614.8
TkA08G156180PF05424Duffy_binding1171510.2412.2
TkA08G156180PF29248TP0900_4th2052490.06613.8
TkA08G156180PF03936Terpene_synth_C2474842.1e-87293.2
TkA08G156180PF19086Terpene_syn_C_22854849.3e-56189.5
TkA08G156180PF20722DUF68302993600.112.5
TkA08G156180PF29248TP0900_4th3313780.06613.8
TkA08G156180PF00278Orn_DAP_Arg_deC3474150.2112.6
TkA08G156180PF07997DUF16943633860.2212.4
TkA08G156180PF05424Duffy_binding3744230.2412.2
TkA08G156180PF29248TP0900_4th3804950.06613.8
TkA08G156180PF01397Terpene_synth4504771.2e-43149.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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