How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA08G087470
Reference: TK1151 Chr: Chr08 Coordinates: 22649532-22650575 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

476 bp · TkA08G087470|TK1151|cDNA

AAGCACACAATATATAATCCACACAGAGACGCGGGGAGATAGAGAGATCGGTGGTGACGGAGACGGCGACGGTGAGAACAGTCGGCGATCAACTGATGAAGACTACGATTTTGAAGAGGAAGAGGAGCGGTAGTAGCAGAAAGGAAACGCAGAAGAGGATGAAAGGTTCGCTGGCTAGACACTTATCGGCTCAGCTAGGTCAAATCTCTTTCAAGCCGCCGCTTCCTCAGAATAGTAACAATCCTTCGCGGTTTCAGAAT...

381 bp · TkA08G087470|TK1151|CDS

ATGAAGACTACGATTTTGAAGAGGAAGAGGAGCGGTAGTAGCAGAAAGGAAACGCAGAAGAGGATGAAAGGTTCGCTGGCTAGACACTTATCGGCTCAGCTAGGTCAAATCTCTTTCAAGCCGCCGCTTCCTCAGAATAGTAACAATCCTTCGCGGTTTCAGAATCTTCCGGATTACGAGGCTCCCGATACATCGGAATCAGCCCCGTCTACATCGTCGTTTCCGTCGGCGACGGTTCTAGATTTCGATACCGATGTCAA...

127 aa · TkA08G087470|TK1151|PROTEIN

MKTTILKRKRSGSSRKETQKRMKGSLARHLSAQLGQISFKPPLPQNSNNPSRFQNLPDYEAPDTSESAPSTSSFPSATVLDFDTDVNVDEKNFILSQDFFCTPDYITPEAPPLPVTLGCDKMEELPC

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA08G087470
TK1151 IDTkA08G087470
OH-1004 IDLXL04_018875
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 25.971
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G087470
LocationChr08:22649532-22650575 (-)
DescriptionSimilar to WEE1: Wee1-like protein kinase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Rice

Reference gene IDPossible functionPapers / DOI
Os02g0135300 Wee1-like protein kinase. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_018875 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000076 DNA replication checkpoint signaling Biological Process
GO:0000278 mitotic cell cycle Biological Process
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle Biological Process
GO:0045786 negative regulation of cell cycle Biological Process
GO:0051301 cell division Biological Process
GO:0051321 meiotic cell cycle Biological Process
GO:0060631 regulation of meiosis I Biological Process
GO:1902750 negative regulation of cell cycle G2/M phase transition Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0000287 magnesium ion binding Molecular Function
GO:0004672 protein kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G02970
dosa:Os02g0135300
dre:327471
xla:398396
xla:399355
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.852
Rank 1 · TkA08G087470 · TK1151
Cytoplasm0.300
Rank 2 · TkA08G087470 · TK1151
Mitochondrion0.043
Rank 3 · TkA08G087470 · TK1151
Cell membrane0.024
Rank 4 · TkA08G087470 · TK1151
Endoplasmic reticulum0.015
Rank 5 · TkA08G087470 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8L4H0Arabidopsis thalianasp|Q8L4H0|WEE1_ARATH Wee1-like protein kinase40.500%Swiss-ProtMedium
Q6Z829Oryza sativa subsp. japonicasp|Q6Z829|WEE1_ORYSJ Wee1-like protein kinase52.800%Swiss-ProtLow

JBrowse

View in Genome Browser