Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2351 bp · TkA08G052270|TK1151|cDNA
AATTGCCACATCTTAATAGGCAAGAACCTTCTGGAAATAAATCTTTACCCTTTATAAAACCACCCTGCTACCCTACCTCCTCCTCATCAAGAGAAAAACAAGCTAATCTGTGAATTTTTACGACAAATTTCTGTGCGATATTCGTATTTGCTCTGTTTTCTGGTGCCTGATCAGAAAGATGTCCGGGAAAGGTGAAGGACCGGCGATTGGTATCGATTTAGGAACGACTTACTCATGCGTCGGTGTTTGGCAGCATGACC...
1947 bp · TkA08G052270|TK1151|CDS
ATGTCCGGGAAAGGTGAAGGACCGGCGATTGGTATCGATTTAGGAACGACTTACTCATGCGTCGGTGTTTGGCAGCATGACCGTGTGGAGATCATTGCTAATGATCAAGGCAACAGGACGACGCCGTCTTATGTTGGGTTTACGGACACCGAGCGTCTTATTGGGGATGCGGCCAAGAACCAGGTGGCCATGAATCCAACCAACACTGTTTTTGATGCTAAGCGTTTAATCGGGAGAAGATTCTCTGATCCGTCGGTGCA...
Protein
Download Protein FASTA648 aa · TkA08G052270|TK1151|PROTEIN
MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKHWPFKVVPGAGDKPMIVVNYKAEEKQFSAEEISSMVLIKMKEIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKAASVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDIS...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G052270 |
|---|---|
| TK1151 ID | TkA08G052270 |
| OH-1004 ID | LXL04_017766 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 95.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G052270 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:13351403-13354151 (+) | |||||||||
| Description | Similar to HSP70: Heat shock cognate 70 kDa protein | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0006457 protein folding Biological Process GO:0006950 response to stress Biological Process GO:0009266 response to temperature stimulus Biological Process GO:0009408 response to heat Biological Process GO:0009615 response to virus Biological Process GO:0009617 response to bacterium Biological Process GO:0010187 negative regulation of seed germination Biological Process GO:0010286 heat acclimation Biological Process GO:0016567 protein ubiquitination Biological Process GO:0042026 protein refolding Biological Process GO:0042742 defense response to bacterium Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT3G12580 ath:AT5G02500 sly:101247772 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01968Hydantoinase_A5-30 aaPF00012HSP709-618 aaPF06723MreB_Mbl10-26 aaPF06723MreB_Mbl132-380 aaPF01968Hydantoinase_A180-217 aaPF21523ParM_N200-235 aaPF02782FGGY_C317-385 aaPF01968Hydantoinase_A322-346 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA08G052270 | PF01968 | Hydantoinase_A | 5 | 30 | 0.26 | 11.2 |
| TkA08G052270 | PF00012 | HSP70 | 9 | 618 | 2.9e-262 | 872.0 |
| TkA08G052270 | PF06723 | MreB_Mbl | 10 | 26 | 4.1e-13 | 49.6 |
| TkA08G052270 | PF06723 | MreB_Mbl | 132 | 380 | 4.1e-13 | 49.6 |
| TkA08G052270 | PF01968 | Hydantoinase_A | 180 | 217 | 0.26 | 11.2 |
| TkA08G052270 | PF21523 | ParM_N | 200 | 235 | 0.14 | 12.9 |
| TkA08G052270 | PF02782 | FGGY_C | 317 | 385 | 0.0039 | 17.8 |
| TkA08G052270 | PF01968 | Hydantoinase_A | 322 | 346 | 0.26 | 11.2 |
| TkA08G052270 | PF06098 | Radial_spoke_3 | 515 | 615 | 0.44 | 10.6 |
| TkA08G052270 | PF06723 | MreB_Mbl | 519 | 580 | 4.1e-13 | 49.6 |
| TkA08G052270 | PF21523 | ParM_N | 550 | 601 | 0.14 | 12.9 |
| TkA08G052270 | PF01968 | Hydantoinase_A | 561 | 598 | 0.26 | 11.2 |
| TkA08G052270 | PF15590 | Imm27 | 574 | 603 | 0.27 | 11.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.