Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2154 bp · TkA08G019850|TK1151|cDNA
CCCAAAATTTGGCACACAAGTACATCTTTCATGTGGTCTGAACCTCTTTGGATATTAGGAGACGTGGAGAATTAATTTACCCGACAGCCAAACATTCATGTCTTTGCGTAGAATAGAGTTGGGTTTTCGTTTCTGAAAGTATAATAAACTAGTAATCACGATCAGGACTGCTTGTAAGGTCACGAGAAGGAAGGAATGGCGTTGCAATTCAGCAGTGCCTGCAACTTCGCTTTTAGCCAGAGAAAAGCCGCACGAATCAG...
1107 bp · TkA08G019850|TK1151|CDS
ATGGCGTTGCAATTCAGCAGTGCCTGCAACTTCGCTTTTAGCCAGAGAAAAGCCGCACGAATCAGAGCAGTCGCTTCAAACGACTTTCTTAAGATAAAAACCGAGGAAGATACGTATGTGAAGCTGGGTGGTTCTGATTTGAAGCTCACAAAGCTTGGAATTGGAGCTTGGTCATGGGGCGATACCAGTTATTGGAACAACTTCGAATGGGATGATAGAAAGATGAAAGCATGTAAGAACGCATTTGATGCGAGCATTGA...
Protein
Download Protein FASTA368 aa · TkA08G019850|TK1151|PROTEIN
MALQFSSACNFAFSQRKAARIRAVASNDFLKIKTEEDTYVKLGGSDLKLTKLGIGAWSWGDTSYWNNFEWDDRKMKACKNAFDASIDSGITWFDTAEVYGSRFSFGAINSETLLGRFIKERKKKYPKEEIAVATKFAALPWRLGRESVISALKDSLSRLELDSVELYQLHWPGIWGNEGYIDGLGDAVEQGLVKAVGVSNYSEKRLREAYKQLKKRGIPLAANQVNYSLIYRIPEENGVKATCDELGISLIAYSPIAQGV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G019850 |
|---|---|
| TK1151 ID | TkA08G019850 |
| OH-1004 ID | LXL04_013411 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 42.300 |
| Protein coverage (%) | TK1151 86.413 / OH-1004 86.740Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G019850 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:4956891-4959958 (+) | |||||||||
| Description | Similar to PLR1: Pyridoxal reductase, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009443 pyridoxal 5'-phosphate salvage Biological Process GO:0042820 vitamin B6 catabolic process Biological Process GO:0042821 pyridoxal biosynthetic process Biological Process GO:0005576 extracellular region Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0009535 chloroplast thylakoid membrane Cellular Component GO:0009536 plastid Cellular Component GO:0009941 chloroplast envelope Cellular Component GO:0010287 plastoglobule Cellular Component GO:0008106 alcohol dehydrogenase (NADP+) activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G06690 ath:AT5G53580 mbo:BQ2027_MB2320 mtc:MT2355 mtu:Rv2298 mtv:RVBD_2298 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00248Aldo_ket_red51-353 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA08G019850 | PF00248 | Aldo_ket_red | 51 | 353 | 1.4e-57 | 195.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.