Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1633 bp · TkA07G426330|TK1151|cDNA
GGAAAAAATCCCTTAAAACCCTAATTTTGACCTCGAATTGACGTTCTTTTTCACCACTTTCATCATCCCCTCTATCTATCCTAATCTTTCCTCCCAAAAAGGCCAAAGCTCCATTGGAAGATAACAGATAAAGCTTTCGTTTCTTTCGGAATTCACCCCAATGTTTTCGTGAATTCTTTTCATACAAGTAAACCCACCTACCCACCCAATCCTCCTTGCGTCTACTCTACAATCATTCCCTCGAATTCCTCATCGCTTTT...
1038 bp · TkA07G426330|TK1151|CDS
ATGGCATTAGTAACCCATCAAATTCAGGGTTCATATGCCCCTCCAAGACCTTTATCTTTGAAGAGAGGGATCGAATCAAAGAAATTTCTAGCAGCTTTTCCAATTGTTAAGAGAGCAGATATTATTTTATTGAAGCATAAATCTTGTTTATGTGTAAAGGCGCCTCAATCAAATAGAAAACCATTAAAAATATCATCTTTCAAAGGACCCATCCAGAACGACGAATCATCATCATCAGGATCAGGATCCAAAGAGAAAAC...
Protein
Download Protein FASTA345 aa · TkA07G426330|TK1151|PROTEIN
MALVTHQIQGSYAPPRPLSLKRGIESKKFLAAFPIVKRADIILLKHKSCLCVKAPQSNRKPLKISSFKGPIQNDESSSSGSGSKEKTGSKSKSTKNPVKLSWAPQDRKETRLSESPKVKNNHASNLEETTTAKSQAIQQLFKSWLTLLRTPSSSSNSSSENQVPNGALEAGTCENEIVETGEKVESSGRGGVVLKLVSRSFLSLDAAIKIPAIIFIPMYLAVNMKYGPEVAKELTPLWICGPLLIALYIKIIQGLCLLYI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G426330 |
|---|---|
| TK1151 ID | TkA07G426330 |
| OH-1004 ID | LXL04_030729 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 91.700 |
| Protein coverage (%) | TK1151 97.971 / OH-1004 33.934Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G426330 |
|---|---|
| Location | Chr07:107793282-107796518 (-) |
| Description | Similar to PCMP-E65: Putative pentatricopeptide repeat-containing protein At1g64310 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006979 response to oxidative stress Biological Process GO:0009451 RNA modification Biological Process GO:0009651 response to salt stress Biological Process GO:0009737 response to abscisic acid Biological Process GO:0080156 mitochondrial mRNA modification Biological Process GO:1900864 mitochondrial RNA modification Biological Process GO:0005739 mitochondrion Cellular Component GO:0009507 chloroplast Cellular Component GO:0003723 RNA binding Molecular Function GO:0008270 zinc ion binding Molecular Function |
| KEGG gene cross-reference | ath:AT1G64310 ath:AT2G03380 ath:AT3G12770 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.