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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G396050
Reference: TK1151 Chr: Chr07 Coordinates: 99484550-99486910 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2298 bp · TkA07G396050|TK1151|cDNA

ATGGCTACCATCATCATCTTCTTCTTCTTCTTCCTCTTCTACCTCTTTCTCTCCGTTCATGGCTTAACCGGCGGCTCATTTCTATCCGTCGAAAACAGCGACGACATTTTAGTTTCGCCAAATGGGCTTTTCACCGCCGGTTTTCATCAGGTCGGAGATAACGCTTACTGCTTCTCTGTGTGGTTCTCCGACCAACCCACCGCCGCCGATCGTACTGTTGTTTGGATGGCTAACAGAGATGAGCCGGTGAACGGAAAATA...

CDS

Download CDS FASTA

2298 bp · TkA07G396050|TK1151|CDS

ATGGCTACCATCATCATCTTCTTCTTCTTCTTCCTCTTCTACCTCTTTCTCTCCGTTCATGGCTTAACCGGCGGCTCATTTCTATCCGTCGAAAACAGCGACGACATTTTAGTTTCGCCAAATGGGCTTTTCACCGCCGGTTTTCATCAGGTCGGAGATAACGCTTACTGCTTCTCTGTGTGGTTCTCCGACCAACCCACCGCCGCCGATCGTACTGTTGTTTGGATGGCTAACAGAGATGAGCCGGTGAACGGAAAATA...

Protein

Download Protein FASTA

765 aa · TkA07G396050|TK1151|PROTEIN

MATIIIFFFFFLFYLFLSVHGLTGGSFLSVENSDDILVSPNGLFTAGFHQVGDNAYCFSVWFSDQPTAADRTVVWMANRDEPVNGKYSKLSLFKDGNLVLTDADQYIIWSTHTKSTSSSLQLKLHDSGNLVLHEREEIIWQSFDYPTDTLLPNQPFTKNAQLVSSRSSTNCSSGFYKLYFDIDSILRLHYEGPESTTVFWPDPGMLPWEVGRYQYMFNRTASLDSSGMMKIDYDGNLRVYSLNERQGRRKWEIQWQAIAH...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G396050
TK1151 IDTkA07G396050
OH-1004 IDLXL04_001178
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)63.000
Protein coverage (%)TK1151 96.601 / OH-1004 95.865
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G396050
LocationChr07:99484550-99486910 (-)
DescriptionSimilar to PK1: Putative receptor protein kinase ZmPK1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g24080 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080. No verified direct reference in this release
At2g19130 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130. No verified direct reference in this release
At4g00340 Serine/threonine-protein kinase. No verified direct reference in this release
At5g60900 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_001178 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0006952 defense response Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0051707 response to other organism Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005516 calmodulin binding Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT1G34300
ath:AT4G00340
ath:AT5G24080
zma:542378
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.824
Rank 1 · TkA07G396050 · TK1151
Endoplasmic reticulum0.085
Rank 2 · TkA07G396050 · TK1151
Cytoplasm0.076
Rank 3 · TkA07G396050 · TK1151
Extracellular0.039
Rank 4 · TkA07G396050 · TK1151
Nucleus0.038
Rank 5 · TkA07G396050 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12946EGF_MSP1_150-58 aa
PF01453B_lectin72-162 aa
PF11605Vps36_ESCRT-II89-131 aa
PF09552RE_BstXI92-168 aa
PF00954S_locus_glycop102-129 aa
PF01453B_lectin218-243 aa
PF00954S_locus_glycop226-291 aa
PF12947EGF_3265-290 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G396050PF12946EGF_MSP1_150580.006117.2
TkA07G396050PF01453B_lectin721621.4e-29103.4
TkA07G396050PF11605Vps36_ESCRT-II891310.1512.9
TkA07G396050PF09552RE_BstXI921680.0613.6
TkA07G396050PF00954S_locus_glycop1021296.5e-0833.8
TkA07G396050PF01453B_lectin2182431.4e-29103.4
TkA07G396050PF00954S_locus_glycop2262916.5e-0833.8
TkA07G396050PF12947EGF_32652900.006417.4
TkA07G396050PF12946EGF_MSP1_12662930.006117.2
TkA07G396050PF29991RIPR_EGF-like_10th2662930.03315.0
TkA07G396050PF14670FXa_inhibition2662925.38.0
TkA07G396050PF08276PAN_23103700.00119.9
TkA07G396050PF12946EGF_MSP1_13443500.006117.2
TkA07G396050PF12947EGF_33443500.006417.4
TkA07G396050PF08276PAN_23784040.00119.9
TkA07G396050PF12947EGF_34014080.006417.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9FLV4Arabidopsis thalianasp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g2408032.300%Swiss-ProtMedium
O64477Arabidopsis thalianasp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g1913029.100%Swiss-ProtLow
Q39203Arabidopsis thalianasp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-230.100%Swiss-ProtMedium
Q39202Arabidopsis thalianasp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK130.000%Swiss-ProtMedium

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