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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA07G394560
Reference: TK1151 Chr: Chr07 Coordinates: 99110721-99111047 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

327 bp · TkA07G394560|TK1151|cDNA

ATGCTCTGCGAAATTGATTTTTTACTGCGAAATGATTTTTTTCTGCGAAATGAATTTACGATAATGCCATTTCGCAGAGCACCCTCTGCGAAATCGAGTTTTCTCTGCGAAATGGATAGCTATTTCGGGAATGTCTCATTTTTTAGGCTATTTGATGGAAGACTTTTGTGGAATCTGGCTATTTCGGTCAAAAACTCAACTAAAATATCACCCTACCCCATCCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTACAAATCT...

327 bp · TkA07G394560|TK1151|CDS

ATGCTCTGCGAAATTGATTTTTTACTGCGAAATGATTTTTTTCTGCGAAATGAATTTACGATAATGCCATTTCGCAGAGCACCCTCTGCGAAATCGAGTTTTCTCTGCGAAATGGATAGCTATTTCGGGAATGTCTCATTTTTTAGGCTATTTGATGGAAGACTTTTGTGGAATCTGGCTATTTCGGTCAAAAACTCAACTAAAATATCACCCTACCCCATCCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTACAAATCT...

108 aa · TkA07G394560|TK1151|PROTEIN

MLCEIDFLLRNDFFLRNEFTIMPFRRAPSAKSSFLCEMDSYFGNVSFFRLFDGRLLWNLAISVKNSTKISPYPILSLALSLSLSTNLFRRRRLVCRSHHWRPDLKSKP

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G394560
TK1151 IDTkA07G394560
OH-1004 IDLXL04_014080
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)95.600
Protein coverage (%)TK1151 62.963 / OH-1004 6.148
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G394560
LocationChr07:99110721-99111047 (+)
DescriptionSimilar to TMK1: Receptor protein kinase TMK1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_014080 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0007165 signal transduction Biological Process
GO:0009555 pollen development Biological Process
GO:0009658 chloroplast organization Biological Process
GO:0010600 regulation of auxin biosynthetic process Biological Process
GO:0010928 regulation of auxin mediated signaling pathway Biological Process
GO:1900055 regulation of leaf senescence Biological Process
GO:2000377 regulation of reactive oxygen species metabolic process Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005794 Golgi apparatus Cellular Component
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-reference
ath:AT1G24650
ath:AT1G66150
ath:AT2G01820
ath:AT3G23750
dosa:Os11g0448000
osa:4350438
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.463
Rank 1 · TkA07G394560 · TK1151
Nucleus0.447
Rank 2 · TkA07G394560 · TK1151
Mitochondrion0.091
Rank 3 · TkA07G394560 · TK1151
Cell membrane0.077
Rank 4 · TkA07G394560 · TK1151
Endoplasmic reticulum0.065
Rank 5 · TkA07G394560 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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