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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G384360
Reference: TK1151 Chr: Chr07 Coordinates: 96404865-96420687 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

4165 bp · TkA07G384360|TK1151|cDNA

CTCACGTGACCAAACACAAATTTGAAAGTTTATTTGAATTCAAATCTGAAAGCGCCGTTTCTTTCAATTAAGTCTCCCCTCTCTCCAAATTCAAAATCTCTTTCTCTCTCTCTCTCACATACAGACACGCACATAGAGAACACAGTTGAAACCCTAGGGTTCTGAATCTGAATCCAGATAGATGGATGGCTCCGATGTAAAAAACGGATCCCAATCCGTTCGAGTAGCTGTCAATATTCGACCGTTGGTTACCCCAGAGC...

CDS

Download CDS FASTA

3768 bp · TkA07G384360|TK1151|CDS

ATGGATGGCTCCGATGTAAAAAACGGATCCCAATCCGTTCGAGTAGCTGTCAATATTCGACCGTTGGTTACCCCAGAGCTTCTTGTTGGTTGCTCGGACTGCATCAGTGTCACTGCAGGCGAACCGCAGGTGCAAATTGGCTCGCATTCTTTCACATTTGATTACGTATATGGGAATTCCGGGTATCCATCGTCTCAGATTTTTGACGACTGCGTTGCTCCTCTTGTTGATGCGCTATTTCATGGCTACAATGCCACAGT...

Protein

Download Protein FASTA

1255 aa · TkA07G384360|TK1151|PROTEIN

MDGSDVKNGSQSVRVAVNIRPLVTPELLVGCSDCISVTAGEPQVQIGSHSFTFDYVYGNSGYPSSQIFDDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYNGEGCNGVIPKVMQMIFKRVEETKGTTEFLIRVSFIEIFKEEVFDLLESNPNAYSKADGTGKPTGPSRAPIQIRETAGGGISLAGVTEAEVTSQEEMASFLLRGSVCRATGSTNMNSQSSRSHAIFTISMEQKRTAGLTNGGAHDDGGDDILCAK...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G384360
TK1151 IDTkA07G384360
OH-1004 IDLXL04_030183
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)98.600
Protein coverage (%)TK1151 98.884 / OH-1004 90.353
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G384360
LocationChr07:96404865-96420687 (-)
DescriptionSimilar to KIN4C: Kinesin-like protein KIN-4C
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g60930 Kinesin-like motor protein involved in the control of the oriented deposition of cellulose microfibrils. No verified direct reference in this release
At5g47820 Kinesin-like motor protein involved in the control of the oriented deposition of cellulose microfibrils.
A kinesin-like protein is essential for oriented deposition of cellulose microfibrils and cell wall strength.2002 · DOI: 10.1105/tpc.005801
Single molecule analysis of the Arabidopsis FRA1 kinesin shows that it is a functional motor protein with unusually high processivity.2011 · DOI: 10.1093/mp/ssr077
Kinesin-4 Functions in Vesicular Transport on Cortical Microtubules and Regulates Cell Wall Mechanics during Cell Elongation in Plants.2015 · DOI: 10.1016/j.molp.2015.01.004

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B9F2Y7 Microtubule-dependent motor protein involved in the control of the oriented deposition of cellulose microfibrils. No verified direct reference in this release
Os09g0114500 Microtubule-dependent motor protein involved in the control of the oriented deposition of cellulose microfibrils.
Mutation of rice BC12/GDD1, which encodes a kinesin-like protein that binds to a GA biosynthesis gene promoter, leads to dwarfism with impaired cell elongation.2011 · DOI: 10.1105/tpc.110.081901
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_030183 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0007052 mitotic spindle organization Biological Process
GO:0009832 plant-type cell wall biogenesis Biological Process
GO:0010215 cellulose microfibril organization Biological Process
GO:0030705 cytoskeleton-dependent intracellular transport Biological Process
GO:0051231 spindle elongation Biological Process
GO:0071555 cell wall organization Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005874 microtubule Cellular Component
GO:0005875 microtubule associated complex Cellular Component
GO:0009506 plasmodesma Cellular Component
KEGG gene cross-reference
ath:AT3G50240
ath:AT5G47820
ath:AT5G60930
dosa:Os02g0742800
dosa:Os02g0742900
ghi:107917911
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.649
Rank 1 · TkA07G384360 · TK1151
Cytoplasm0.354
Rank 2 · TkA07G384360 · TK1151
Cell membrane0.051
Rank 3 · TkA07G384360 · TK1151
Mitochondrion0.031
Rank 4 · TkA07G384360 · TK1151
Golgi apparatus0.029
Rank 5 · TkA07G384360 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd12-152 aa
PF00225Kinesin43-364 aa
PF09769ApoO353-394 aa
PF10473CENP-F_leu_zip367-438 aa
PF25764KIF21A_4th377-430 aa
PF13870CCDC113_CCDC96_CC377-456 aa
PF25764KIF21A_4th411-500 aa
PF00225Kinesin419-453 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G384360PF16796Microtub_bd121523.7e-1969.9
TkA07G384360PF00225Kinesin433642.3e-104349.6
TkA07G384360PF09769ApoO3533942.19.0
TkA07G384360PF10473CENP-F_leu_zip3674380.003818.0
TkA07G384360PF25764KIF21A_4th3774303.8e-54183.9
TkA07G384360PF13870CCDC113_CCDC96_CC3774560.0004220.8
TkA07G384360PF25764KIF21A_4th4115003.8e-54183.9
TkA07G384360PF00225Kinesin4194532.3e-104349.6
TkA07G384360PF13870CCDC113_CCDC96_CC4815020.0004220.8
TkA07G384360PF25764KIF21A_4th5387113.8e-54183.9
TkA07G384360PF13870CCDC113_CCDC96_CC5536150.0004220.8
TkA07G384360PF10473CENP-F_leu_zip5536450.003818.0
TkA07G384360PF16796Microtub_bd5746113.7e-1969.9
TkA07G384360PF13870CCDC113_CCDC96_CC5946840.0004220.8
TkA07G384360PF09769ApoO5966492.19.0
TkA07G384360PF10473CENP-F_leu_zip6447390.003818.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4K0J3Arabidopsis thalianasp|F4K0J3|KN4C_ARATH Kinesin-like protein KIN-4C60.300%Swiss-ProtHigh
Q8GS71Arabidopsis thalianasp|Q8GS71|KN4A_ARATH Kinesin-like protein KIN-4A52.000%Swiss-ProtHigh
B9F2Y7Oryza sativa subsp. japonicasp|B9F2Y7|KN4C_ORYSJ Kinesin-like protein KIN-4C55.500%Swiss-ProtHigh
Q6YUL8Oryza sativa subsp. japonicasp|Q6YUL8|KN4A_ORYSJ Kinesin-like protein KIN-4A51.700%Swiss-ProtHigh

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