TkA07G275100 | RubberDandelionOmics

Gene overview

TkA07G275100

Reference: TK1151 Chr: Chr07 Coordinates: 68795564-68795899 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

336 bp · TkA07G275100|TK1151|cDNA

GTGCAGTTATTGCAGGTTTGGAGAGATTGGTGGTTAGGAAAAGATCGAAATTTAATTGATCCTAGAATTCATGCCAATTTAAGCATTACAGCAAGATTCATTCTCATTGGGCTGCTGTGTATTTCACAAGATGCAGCTGACAGACCAACAATGGAGGAAGTTGTTGCCATGCTGACCAACAAGAATCTCCCTATACCAAAACTGTCTATGCCAACATGGATTATAGAAAATGATTTAGATGTTGTACAACAGATGTCCCA...

CDS

Download CDS FASTA

336 bp · TkA07G275100|TK1151|CDS

GTGCAGTTATTGCAGGTTTGGAGAGATTGGTGGTTAGGAAAAGATCGAAATTTAATTGATCCTAGAATTCATGCCAATTTAAGCATTACAGCAAGATTCATTCTCATTGGGCTGCTGTGTATTTCACAAGATGCAGCTGACAGACCAACAATGGAGGAAGTTGTTGCCATGCTGACCAACAAGAATCTCCCTATACCAAAACTGTCTATGCCAACATGGATTATAGAAAATGATTTAGATGTTGTACAACAGATGTCCCA...

Protein

Download Protein FASTA

111 aa · TkA07G275100|TK1151|PROTEIN

VQLLQVWRDWWLGKDRNLIDPRIHANLSITARFILIGLLCISQDAADRPTMEEVVAMLTNKNLPIPKLSMPTWIIENDLDVVQQMSHNYHLMTIDLRPLSVGDSIPEPQPQ

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkA07G275100`
TK1151 ID	TkA07G275100
OH-1004 ID	LXL04_001341
Relationship / confidence	Multi Source To Oh1004 / Complex relationship
Protein identity (%)	54.800
Protein coverage (%)	TK1151 63.063 / OH-1004 10.928 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID TkA07G275100

Location Chr07:68795564-68795899 (+)

Description Similar to ANX2: Receptor-like protein kinase ANXUR2

Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At4g23260`	Cysteine-rich receptor-like protein kinase 18.	No verified direct reference in this release
`At4g23160`	Cysteine-rich receptor-like protein kinase 8.	No verified direct reference in this release
`At4g23180`	Cysteine-rich receptor-like protein kinase 10.	No verified direct reference in this release
`At3g45860`	Cysteine-rich receptor-like protein kinase 4.	No verified direct reference in this release
`At4g23280`	Putative cysteine-rich receptor-like protein kinase 20.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source

View annotation sources

Functional annotation source: OH1004 · LXL04_001341 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)

GO:0010038 response to metal ion Biological Process

GO:0005576 extracellular region Cellular Component

GO:0005886 plasma membrane Cellular Component

GO:0009536 plastid Cellular Component

GO:0016324 apical plasma membrane Cellular Component

GO:0090404 pollen tube tip Cellular Component

GO:0004672 protein kinase activity Molecular Function

GO:0004674 protein serine/threonine kinase activity Molecular Function

GO:0004714 transmembrane receptor protein tyrosine kinase activity Molecular Function

GO:0005524 ATP binding Molecular Function

GO:0106310 protein serine kinase activity Molecular Function

KEGG gene cross-reference

ath:AT5G28680

ath:AT5G38990

ath:AT5G39000

These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.453

Rank 1 · TkA07G275100 · TK1151

Cytoplasm0.354

Rank 2 · TkA07G275100 · TK1151

Nucleus0.246

Rank 3 · TkA07G275100 · TK1151

Endoplasmic reticulum0.070

Rank 4 · TkA07G275100 · TK1151

Golgi apparatus0.067

Rank 5 · TkA07G275100 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

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Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

Protein	Organism	Description	Identity	Database	Confidence
`Q8RX80`	Arabidopsis thaliana	sp\|Q8RX80\|CRK18_ARATH Cysteine-rich receptor-like protein kinase 18	36.500%	Swiss-Prot	Medium
`O65468`	Arabidopsis thaliana	sp\|O65468\|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8	32.400%	Swiss-Prot	Medium
`Q8GYA4`	Arabidopsis thaliana	sp\|Q8GYA4\|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10	39.400%	Swiss-Prot	Medium
`Q9LZU4`	Arabidopsis thaliana	sp\|Q9LZU4\|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4	41.700%	Swiss-Prot	Medium
`O65479`	Arabidopsis thaliana	sp\|O65479\|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20	41.700%	Swiss-Prot	Medium

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