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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA07G065380
Reference: TK1151 Chr: Chr07 Coordinates: 17252728-17253123 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

396 bp · TkA07G065380|TK1151|cDNA

CAGTTGAACACGGTCGGCGGTCAGCCTGTCTGTCTCGGCGACCACGTCGTTATTCGCAGGTCGCTAGTTGCAGGTCGCAACTTTGTCTCTCCCCGTCTCCTACAGTGTCGCACAGCGGCACAGTCCACAGGACCACAAGTTCATACTTTCGCATCGAACACGCTCAGGCGTCCACAAAAAAATTCACGCTCACACTCAGACTTCTTCAATCTCTTCGCTCCTGCACCTCTCAAACCCGCCGCCCATGACAACCATATTCC...

396 bp · TkA07G065380|TK1151|CDS

CAGTTGAACACGGTCGGCGGTCAGCCTGTCTGTCTCGGCGACCACGTCGTTATTCGCAGGTCGCTAGTTGCAGGTCGCAACTTTGTCTCTCCCCGTCTCCTACAGTGTCGCACAGCGGCACAGTCCACAGGACCACAAGTTCATACTTTCGCATCGAACACGCTCAGGCGTCCACAAAAAAATTCACGCTCACACTCAGACTTCTTCAATCTCTTCGCTCCTGCACCTCTCAAACCCGCCGCCCATGACAACCATATTCC...

131 aa · TkA07G065380|TK1151|PROTEIN

QLNTVGGQPVCLGDHVVIRRSLVAGRNFVSPRLLQCRTAAQSTGPQVHTFASNTLRRPQKNSRSHSDFFNLFAPAPLKPAAHDNHIPPQQLQPFHTPSIQQPLDFPTQVLLNQIRFLHKRILGLILILIHY

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G065380
TK1151 IDTkA07G065380
OH-1004 IDLXL04_000017
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)83.700
Protein coverage (%)TK1151 32.824 / OH-1004 18.455
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G065380
LocationChr07:17252728-17253123 (+)
DescriptionSimilar to At3g47300: SelT-like protein
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_000017 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0045454 cell redox homeostasis Biological Process
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0012505 endomembrane system Cellular Component
GO:0004791 thioredoxin-disulfide reductase (NADPH) activity Molecular Function
KEGG gene cross-reference
ath:AT3G47300
cel:CELE_C35C5.3
cel:CELE_F28H7.4
dme:Dmel_CG3887
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.357
Rank 1 · TkA07G065380 · TK1151
Nucleus0.319
Rank 2 · TkA07G065380 · TK1151
Mitochondrion0.301
Rank 3 · TkA07G065380 · TK1151
Cell membrane0.053
Rank 4 · TkA07G065380 · TK1151
Endoplasmic reticulum0.040
Rank 5 · TkA07G065380 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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