Gene Card
Gene overview
cDNA / CDS / Protein Sequences
549 bp · TkA07G033510|TK1151|cDNA
ATGTACTCTTTGTATGTAACTTCCTTGAATCTCGCCACCCCATCACGAGCCACCACCGCCGGAAACGGCCCTATTTTTGCAACCGGAACCGGAGCATTGAATATAGGAATCGACACTCTTGATGCACTACTTGTGGTTCGAACTACATGTTCTGCACTTTTATACATCCCATTGCTTAAAATCTATCATCAACACAACTTCCTTTGTGTACTTGATTCTTTAGTACAAGTATACATACACATATTATATACAAGTTATAT...
549 bp · TkA07G033510|TK1151|CDS
ATGTACTCTTTGTATGTAACTTCCTTGAATCTCGCCACCCCATCACGAGCCACCACCGCCGGAAACGGCCCTATTTTTGCAACCGGAACCGGAGCATTGAATATAGGAATCGACACTCTTGATGCACTACTTGTGGTTCGAACTACATGTTCTGCACTTTTATACATCCCATTGCTTAAAATCTATCATCAACACAACTTCCTTTGTGTACTTGATTCTTTAGTACAAGTATACATACACATATTATATACAAGTTATAT...
Protein
Download Protein FASTA182 aa · TkA07G033510|TK1151|PROTEIN
MYSLYVTSLNLATPSRATTAGNGPIFATGTGALNIGIDTLDALLVVRTTCSALLYIPLLKIYHQHNFLCVLDSLVQVYIHILYTSYMKLINLQHIADVDDKSTFGGCTGGFTTLPGVSLDTPNFKKSSKKNFLDPPLSRHLISQILRSRHLSDPPPLLSLPPIKYLSLPPISRTKSESFMRF
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G033510 |
|---|---|
| TK1151 ID | TkA07G033510 |
| OH-1004 ID | LXL04_027103 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 85.500 |
| Protein coverage (%) | TK1151 41.758 / OH-1004 29.457Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G033510 |
|---|---|
| Location | Chr07:8931358-8931906 (-) |
| Description | Similar to PEX1: Pollen-specific leucine-rich repeat extensin-like protein 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009860 pollen tube growth Biological Process GO:0071555 cell wall organization Biological Process GO:0005576 extracellular region Cellular Component GO:0005634 nucleus Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009505 plant-type cell wall Cellular Component GO:0009506 plasmodesma Cellular Component GO:0090404 pollen tube tip Cellular Component GO:0099503 secretory vesicle Cellular Component GO:0005199 structural constituent of cell wall Molecular Function GO:0042277 peptide binding Molecular Function |
| KEGG gene cross-reference | ath:AT2G15880 ath:AT3G19020 ath:AT3G24480 ath:AT4G13340 ath:AT4G33970 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.