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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G006480
Reference: TK1151 Chr: Chr07 Coordinates: 1801958-1809496 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

5124 bp · TkA07G006480|TK1151|cDNA

AAAAGATCCAAAAGAACCAGAATAATTGAATAAACCTCCACCAATTATTGCCGATGAACAAGATTAAAAATCACTAGTAAGAGAAACAAAGCGCAAAAAGTGTGTGTTCAACAAGCTACAACAATAAGATTAAAAATCACTAGTAAGAGAAACAAAGCGCAAAAAGTGTGTGTTCAACAAGCTACAACAATAAGATTAAAAATCACTAGTAAGAGAAACAAAGCGCAAAAAGTGTGTGTTCAACAAGCTACAACAATGGT...

CDS

Download CDS FASTA

966 bp · TkA07G006480|TK1151|CDS

ATGGTGGCACATGTGAGTGTCATCTCCTTCTCCTCTTCTTGTCATCTCCTTCATTCTTCACCCCAGTTATCTCTCTCTTTGCATAAACCCATCGCAATGGCGACAATGAATACGGATCCAGTACGAGAATGGATTCTAACAGAAGGAAAAGCGACTCAAATAACCGGGATTAGTCCGGTCGGCGGTGGTTGCATCAATCTTGCAAGCCGATACAACACCGATGCCGGTTCTTTTTTCGTTAAGACAAATAGGAGTATTGG...

Protein

Download Protein FASTA

321 aa · TkA07G006480|TK1151|PROTEIN

MVAHVSVISFSSSCHLLHSSPQLSLSLHKPIAMATMNTDPVREWILTEGKATQITGISPVGGGCINLASRYNTDAGSFFVKTNRSIGPEMFEGEALGLNAMYETNSIRVPRPYKVGELPTGGSYIIMEFIEFGSSRGDQAVLGRKLAEMHKAAKSEKGFGFHVNNTIGSTPQINTWTSDWVDFYAEHRLTFQLKLAQQQFGDSAIYEKGQRLVKNLGALFEDVTIEPCLLHGDLWSGNISSDKNGEPVILDPACYYGHNE...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G006480
TK1151 IDTkA07G006480
OH-1004 IDLXL04_026765
Relationship / confidenceRbh Sequence Supported / Probable
Protein identity (%)90.300
Protein coverage (%)TK1151 98.442 / OH-1004 96.409
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G006480
LocationChr07:1801958-1809496 (+)
DescriptionSimilar to At3g61080: Protein-ribulosamine 3-kinase, chloroplastic
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g61080 Initiates a process leading to the deglycation of proteins. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2XBT1 Initiates a process leading to the deglycation of proteins. No verified direct reference in this release
Os03g0117800 Initiates a process leading to the deglycation of proteins. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_026765 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0036528 peptidyl-lysine deglycation Biological Process
GO:0043687 post-translational protein modification Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005829 cytosol Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0016301 kinase activity Molecular Function
GO:0102193 protein-ribulosamine 3-kinase activity Molecular Function
KEGG gene cross-reference
ath:AT3G61080
dosa:Os03g0117800
hsa:79672
mmu:238024
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Plastid0.514
Rank 1 · TkA07G006480 · TK1151
Cytoplasm0.333
Rank 2 · TkA07G006480 · TK1151
Mitochondrion0.171
Rank 3 · TkA07G006480 · TK1151
Nucleus0.145
Rank 4 · TkA07G006480 · TK1151
Peroxisome0.090
Rank 5 · TkA07G006480 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF03881Fructosamin_kin41-316 aa
PF01636APH57-280 aa
PF03109ABC1103-131 aa
PF07914DUF1679206-243 aa
PF03109ABC1208-251 aa
PF07387Seadorna_VP7227-255 aa
PF27024Phage_T7_kinase233-257 aa
PF27024Phage_T7_kinase305-320 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G006480PF03881Fructosamin_kin413165e-99331.9
TkA07G006480PF01636APH572808e-0936.3
TkA07G006480PF03109ABC11031310.3510.7
TkA07G006480PF07914DUF16792062430.3410.5
TkA07G006480PF03109ABC12082510.3510.7
TkA07G006480PF07387Seadorna_VP72272550.2111.3
TkA07G006480PF27024Phage_T7_kinase2332571.09.1
TkA07G006480PF27024Phage_T7_kinase3053201.09.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LEW8Arabidopsis thalianasp|Q9LEW8|FN3KR_ARATH Protein-ribulosamine 3-kinase, chloroplastic80.600%Swiss-ProtHigh
A2XBT1Oryza sativa subsp. indicasp|A2XBT1|FN3KR_ORYSI Protein-ribulosamine 3-kinase, chloroplastic80.600%Swiss-ProtHigh
Q10SM2Oryza sativa subsp. japonicasp|Q10SM2|FN3KR_ORYSJ Protein-ribulosamine 3-kinase, chloroplastic80.600%Swiss-ProtHigh

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