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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA06G447320
Reference: TK1151 Chr: Chr06 Coordinates: 110521676-110525762 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1605 bp · TkA06G447320|TK1151|cDNA

TTAGGTTTCTAGTGGCCAACGTTAAAGGCCGTCAAAAGGGACCAAACACGCCACCAGCAGCATAAGCCCTAGTTCTTGACGCCGCTTATATTCCCCATCTCCATTCACAATCTTTAAATTTCACAGCTTGCAAATCCAGTCTCCCCGTGTTTCCTCAACAGATCAGATCTCCCAGTCAGGTTTGAATCAGCTTCATCATGTTTGGGCGTGTTCCAAAAAAGAGTGATAATACAAAGTATTATGAAGTTCTAGGTGTCCCA...

CDS

Download CDS FASTA

1275 bp · TkA06G447320|TK1151|CDS

ATGTTTGGGCGTGTTCCAAAAAAGAGTGATAATACAAAGTATTATGAAGTTCTAGGTGTCCCACAATCTGCCACTCCAGATGAATTAAAGAAGGCTTACCGTAAGGCTGCCATAAAGAACCATCCTGACAAAGGTGGTGACCCTGAGAAGTTCAAGGAATTGGCACAAGCATATGAAGTTCTTAATGATCCAGAAAAAAGAGAGATATATGATGAATATGGTGAAGATGCTCTGAAAGAGGGCATGGGAGGTGGTGGCAG...

Protein

Download Protein FASTA

424 aa · TkA06G447320|TK1151|PROTEIN

MFGRVPKKSDNTKYYEVLGVPQSATPDELKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLNDPEKREIYDEYGEDALKEGMGGGGSSSESPFDIFEQFFGGGGGFGGGFGGGGGSRTRKKQGEDVKQVLKVSLEEVYNGITKKLSLSRNILCKKCKGKGSKSGASSRCFGCQGSGMRVTTRQIGPGMIQQMQHVCPECRGSGESISERDRCQPCKGKKVTQEKRVLEVHVEKGMQNGQKIVFEGQADEAPDTVTGDIVF...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G447320
TK1151 IDTkA06G447320
OH-1004 IDLXL04_022779
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G447320
LocationChr06:110521676-110525762 (+)
DescriptionSimilar to DJA6: Chaperone protein dnaJ A6
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g44110 Plays a continuous role in plant development probably in the structural organization of compartments. No verified direct reference in this release
At5g22060 Plays a continuous role in plant development probably in the structural organization of compartments. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0549600 Involved in disease resistance.
The DnaJ protein OsDjA6 negatively regulates rice innate immunity to the blast fungus Magnaporthe oryzae.2018 · DOI: 10.1111/mpp.12546
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_022779 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006457 protein folding Biological Process
GO:0006952 defense response Biological Process
GO:0009408 response to heat Biological Process
GO:0034605 cellular response to heat Biological Process
GO:0042026 protein refolding Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0009536 plastid Cellular Component
KEGG gene cross-reference
ath:AT5G22060
dosa:Os04g0549600
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.682
Rank 1 · TkA06G447320 · TK1151
Nucleus0.370
Rank 2 · TkA06G447320 · TK1151
Cell membrane0.129
Rank 3 · TkA06G447320 · TK1151
Endoplasmic reticulum0.108
Rank 4 · TkA06G447320 · TK1151
Mitochondrion0.079
Rank 5 · TkA06G447320 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00226DnaJ13-71 aa
PF30912TIM141_C17-49 aa
PF01556DnaJ_C128-348 aa
PF30912TIM141_C143-161 aa
PF18551TackOD1148-175 aa
PF27659CHP02642149-179 aa
PF01155HypA150-180 aa
PF16685zf-RING_10150-173 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G447320PF00226DnaJ13713e-2382.4
TkA06G447320PF30912TIM141_C17495.4e-0523.8
TkA06G447320PF01556DnaJ_C1283481.4e-36126.6
TkA06G447320PF30912TIM141_C1431615.4e-0523.8
TkA06G447320PF18551TackOD11481751.19.4
TkA06G447320PF27659CHP026421491790.001518.8
TkA06G447320PF01155HypA1501801.69.5
TkA06G447320PF16685zf-RING_101501738.77.2
TkA06G447320PF28686HUA1_small1511729.46.9
TkA06G447320PF07191Zn_ribbon_61522015.47.8
TkA06G447320PF00684DnaJ_CXXCXGXG1532199.3e-1555.4
TkA06G447320PF15777Anti-TRAP1531800.000919.9
TkA06G447320PF01155HypA1902221.69.5
TkA06G447320PF15777Anti-TRAP1922210.000919.9
TkA06G447320PF18551TackOD11922261.19.4
TkA06G447320PF16685zf-RING_101922318.77.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q94AW8Arabidopsis thalianasp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 365.400%Swiss-ProtHigh
P42825Arabidopsis thalianasp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 264.700%Swiss-ProtHigh
Q0JB88Oryza sativa subsp. japonicasp|Q0JB88|DJA6_ORYSJ Chaperone protein dnaJ A664.600%Swiss-ProtHigh

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