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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA06G431450
Reference: TK1151 Chr: Chr06 Coordinates: 106774889-106776034 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1068 bp · TkA06G431450|TK1151|cDNA

ATGCAGTCGCACTTTGAACAAGCACTCAACAATCTCTCCGATGTCACCTGCATTGTTTCCGATGGGTTTCTGAGTTGGACGCTCGAATCAGCAAATAAGTTAGGGATTCCTCGCGTATCGTTTTTTGGCATGACCGGGTATTCAACCGCCGTGGCTCTAGAAGTGGGTGTGAACCGGCTGTTGTCGGGACCTGAGTCCGACTCCGACGACGGCTTAATCACCGTGACCAATTTCCCATGGATTAAAGTCACTAGGAACGA...

1068 bp · TkA06G431450|TK1151|CDS

ATGCAGTCGCACTTTGAACAAGCACTCAACAATCTCTCCGATGTCACCTGCATTGTTTCCGATGGGTTTCTGAGTTGGACGCTCGAATCAGCAAATAAGTTAGGGATTCCTCGCGTATCGTTTTTTGGCATGACCGGGTATTCAACCGCCGTGGCTCTAGAAGTGGGTGTGAACCGGCTGTTGTCGGGACCTGAGTCCGACTCCGACGACGGCTTAATCACCGTGACCAATTTCCCATGGATTAAAGTCACTAGGAACGA...

355 aa · TkA06G431450|TK1151|PROTEIN

MQSHFEQALNNLSDVTCIVSDGFLSWTLESANKLGIPRVSFFGMTGYSTAVALEVGVNRLLSGPESDSDDGLITVTNFPWIKVTRNDFDQPFNQPDPTGREVDCLMEIVVAIANSHGLIMNSFYELEPLFIDYLNREYSTFKAWCVGPLCLELSQGRSVLYVAFGSQVEISTPQLKAIAKGLEDSQVSFLWVVRKSEMTISHIIDDLQKKVGERGIIVGEWVDQREILKHESVKGFVSHCGLNSVMESICSEVPILAWPM...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G431450
TK1151 IDTkA06G431450
OH-1004 IDLXL04_014516
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)92.900
Protein coverage (%)TK1151 100.000 / OH-1004 79.375
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G431450
LocationChr06:106774889-106776034 (+)
DescriptionSimilar to UGT90A1: UDP-glycosyltransferase 90A1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g16890 UDP-glycosyltransferase 90A1. No verified direct reference in this release
At1g10400 UDP-glycosyltransferase 90A2. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_014516 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0016134 saponin metabolic process Biological Process
GO:0009507 chloroplast Cellular Component
GO:0035251 UDP-glucosyltransferase activity Molecular Function
KEGG gene cross-reference
ag:AFN26666
ag:AFN26667
ath:AT1G10400
ath:AT2G16890
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.756
Rank 1 · TkA06G431450 · TK1151
Nucleus0.205
Rank 2 · TkA06G431450 · TK1151
Peroxisome0.083
Rank 3 · TkA06G431450 · TK1151
Endoplasmic reticulum0.069
Rank 4 · TkA06G431450 · TK1151
Cell membrane0.045
Rank 5 · TkA06G431450 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF06722EryCIII-like_C29-41 aa
PF30684AAA_RNF213_5101-142 aa
PF26168Glyco_transf_N112-149 aa
PF00201UDPGT156-312 aa
PF30684AAA_RNF213_5181-219 aa
PF21228RuBisCO_activase_AAA_helical230-251 aa
PF06722EryCIII-like_C232-279 aa
PF26168Glyco_transf_N252-268 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G431450PF06722EryCIII-like_C29410.08513.5
TkA06G431450PF30684AAA_RNF213_51011420.2911.6
TkA06G431450PF26168Glyco_transf_N1121490.003418.0
TkA06G431450PF00201UDPGT1563125.7e-2072.3
TkA06G431450PF30684AAA_RNF213_51812190.2911.6
TkA06G431450PF21228RuBisCO_activase_AAA_helical2302510.08713.9
TkA06G431450PF06722EryCIII-like_C2322790.08513.5
TkA06G431450PF26168Glyco_transf_N2522680.003418.0
TkA06G431450PF21228RuBisCO_activase_AAA_helical2793130.08713.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9ZVX4Arabidopsis thalianasp|Q9ZVX4|U90A1_ARATH UDP-glycosyltransferase 90A151.900%Swiss-ProtHigh
Q9SY84Arabidopsis thalianasp|Q9SY84|U90A2_ARATH UDP-glycosyltransferase 90A246.800%Swiss-ProtMedium

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