Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1715 bp · TkA06G396800|TK1151|cDNA
GTAAAGTAATAGTGTATTATTTTACAGCAACGGTCACGTGCGATACTCATAGAGGGTAAAAGAGGAAGTACGCAAAAGAAGAATCTACACAAGTGTCATATTCGATCATACCGTGGCTACCACAAACCCAGAAGAAGGGGAGGCAAACAATAGCCGTCTCCAGTCGTTTTTAGCGTCGCTCTTGACGAGTATAGGAGGTGTTTTTGGTCATAATCAAGAACTAGAAGAAGACATGACGTCGAACGAACCTGTTCTTCCGA...
1206 bp · TkA06G396800|TK1151|CDS
ATGACGTCGAACGAACCTGTTCTTCCGATTCAACATCCAAACAGAGATGTGAATCAGAAGAACGCTGGGCAAGGAGAAAGAAGGAATCGCCGGGCCCTTGGTGACATCGGGAACCTCGTTCCTGTTCCAACTCTTCCCGAAATTGGAAAGCCCCAACCACAGATTTCTCGTCCAATCACAAGAACTTTCCGAGCCCAACTAGTCGCAAACGCACAATCAGTAGTAGACAAGAACATAAAGAAACCACAAGAAACCGAAGA...
Protein
Download Protein FASTA401 aa · TkA06G396800|TK1151|PROTEIN
MTSNEPVLPIQHPNRDVNQKNAGQGERRNRRALGDIGNLVPVPTLPEIGKPQPQISRPITRTFRAQLVANAQSVVDKNIKKPQETEETPKRKPKKPTKSLTSVLTARSKFACGITTKPTDPIINIDESDINNELAEVEYVEDIYKFYKLSESEGGITDYINSQPDLNAKMRAILIDWLIEVHRKFELMPESLYLTVNIVDRYLSMKTVPRRELQLVGISGMLIACKYEEIWPPEVNDLIAISDNAYTREQILGMEKAVLG...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G396800 |
|---|---|
| TK1151 ID | TkA06G396800 |
| OH-1004 ID | LXL04_023124 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 97.500 |
| Protein coverage (%) | TK1151 99.252 / OH-1004 99.500Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G396800 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:98342166-98344681 (+) | |||||||||
| Description | Similar to CYCB1-2: Cyclin-B1-2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000082 G1/S transition of mitotic cell cycle Biological Process GO:0010332 response to gamma radiation Biological Process GO:0044772 mitotic cell cycle phase transition Biological Process GO:0051301 cell division Biological Process GO:0000307 cyclin-dependent protein kinase holoenzyme complex Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G26760 ath:AT5G06150 dosa:Os01g0805600 gmx:547920 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00134Cyclin_N142-267 aaPF02984Cyclin_C269-387 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA06G396800 | PF00134 | Cyclin_N | 142 | 267 | 6.1e-47 | 159.2 |
| TkA06G396800 | PF02984 | Cyclin_C | 269 | 387 | 8.8e-35 | 120.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.