Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1674 bp · TkA06G149510|TK1151|cDNA
ATGATGGAGTCTGGATACCAGATTAATGAATGTGACAAGTGTGTTTATGTTAAAAACACAAGTGATGGTTATGCCATCTTGTGCCTTTATGTTGATGATATGCTTATCGTTGGTAGCAATGACAAGATGATTCAATCAACTAAAAATATGTTAAAGGCAAGATTTGACATGAAAGATATGAGTTTGGCCGACGTGATCCTCGGTGTGAAGATCACAATGGCAGAAAATGGACTTACATTAAGTCAAACTCATTACGTTGA...
1674 bp · TkA06G149510|TK1151|CDS
ATGATGGAGTCTGGATACCAGATTAATGAATGTGACAAGTGTGTTTATGTTAAAAACACAAGTGATGGTTATGCCATCTTGTGCCTTTATGTTGATGATATGCTTATCGTTGGTAGCAATGACAAGATGATTCAATCAACTAAAAATATGTTAAAGGCAAGATTTGACATGAAAGATATGAGTTTGGCCGACGTGATCCTCGGTGTGAAGATCACAATGGCAGAAAATGGACTTACATTAAGTCAAACTCATTACGTTGA...
Protein
Download Protein FASTA557 aa · TkA06G149510|TK1151|PROTEIN
MMESGYQINECDKCVYVKNTSDGYAILCLYVDDMLIVGSNDKMIQSTKNMLKARFDMKDMSLADVILGVKITMAENGLTLSQTHYVDKILEKFNSGDSSIARTPIDTSHHLSKNRGEGVEQVECARMIGSLMYLMSCTRPDLAFAISRLSRYTSNPNAEHWKRYTDANWISDIRDSKSTSGYLFTLGGGAISWKSSKQTVTGRSTMESEFIALDKSGEEAEWLRQFLEYIPGCPKPVSAISIHCDSKSAIGRAQSVMYNV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G149510 |
|---|---|
| TK1151 ID | TkA06G149510 |
| OH-1004 ID | LXL04_011844 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 46.300 |
| Protein coverage (%) | TK1151 46.499 / OH-1004 18.919Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G149510 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:39212733-39216647 (-) | |||||||||
| Description | Similar to DHFS: Dihydrofolate synthetase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006281 DNA repair Biological Process GO:0006508 proteolysis Biological Process GO:0006730 one-carbon metabolic process Biological Process GO:0009396 folic acid-containing compound biosynthetic process Biological Process GO:0009793 embryo development ending in seed dormancy Biological Process GO:0015074 DNA integration Biological Process GO:0046654 tetrahydrofolate biosynthetic process Biological Process GO:0071897 DNA biosynthetic process Biological Process GO:0005737 cytoplasm Cellular Component GO:0005759 mitochondrial matrix Cellular Component GO:0042575 DNA polymerase complex Cellular Component GO:0003676 nucleic acid binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT5G41480 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF07727RVT_22-105 aaPF00560LRR_1406-427 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA06G149510 | PF07727 | RVT_2 | 2 | 105 | 8.4e-21 | 75.4 |
| TkA06G149510 | PF00560 | LRR_1 | 406 | 427 | 0.18 | 12.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.