Gene Card
Gene overview
cDNA / CDS / Protein Sequences
669 bp · TkA06G051020|TK1151|cDNA
TCCTTCCCACCAAATCTATCTTTCAGTAAGAAATCCCTCAGGGACATCGATATCCCGCCCCGCAAGCTCCTCAGCCGCCGCTCCTGCTCCGCCACCTCGCCGGAGGCGCTCATGGATATGTACAATCAGCAACAGAATGAGTCTCCAGGGTTCTTCCGGAGGAGCAACTGTTTAAGAAATTCTTGCCTTGTAACTCCGGTGGGGATTCCGATGAAGATGCCGATCCTTACTCTGCTGATCATTTCCGTATTTACGAGTTT...
669 bp · TkA06G051020|TK1151|CDS
TCCTTCCCACCAAATCTATCTTTCAGTAAGAAATCCCTCAGGGACATCGATATCCCGCCCCGCAAGCTCCTCAGCCGCCGCTCCTGCTCCGCCACCTCGCCGGAGGCGCTCATGGATATGTACAATCAGCAACAGAATGAGTCTCCAGGGTTCTTCCGGAGGAGCAACTGTTTAAGAAATTCTTGCCTTGTAACTCCGGTGGGGATTCCGATGAAGATGCCGATCCTTACTCTGCTGATCATTTCCGTATTTACGAGTTT...
Protein
Download Protein FASTA222 aa · TkA06G051020|TK1151|PROTEIN
SFPPNLSFSKKSLRDIDIPPRKLLSRRSCSATSPEALMDMYNQQQNESPGFFRRSNCLRNSCLVTPVGIPMKMPILTLLIISVFTSLRFGSALAADLMTGPTVRLLILAKRPAGGVRVGIITWGLSVRTSAVGIVAGVIRVSLLMEFLSAGFILLVTGLKRARTGKTASGKSVFFRSHPSSAPRGAGGDDNPVKKHHDESCHCCAHCRCLSGVHHSNSPTSI
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G051020 |
|---|---|
| TK1151 ID | TkA06G051020 |
| OH-1004 ID | LXL04_025570 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 41.300 |
| Protein coverage (%) | TK1151 96.396 / OH-1004 55.584Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G051020 |
|---|---|
| Location | Chr06:13860674-13861342 (+) |
| Description | Similar to TZF4: Zinc finger CCCH domain-containing protein 2 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0006355 regulation of DNA-templated transcription Biological Process GO:0006979 response to oxidative stress Biological Process GO:0009867 jasmonic acid mediated signaling pathway Biological Process GO:0010150 leaf senescence Biological Process GO:0010187 negative regulation of seed germination Biological Process GO:0050832 defense response to fungus Biological Process GO:0051607 defense response to virus Biological Process GO:0000932 P-body Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005886 plasma membrane Cellular Component |
| KEGG gene cross-reference | ath:AT1G03790 ath:AT2G19810 ath:AT4G29190 ath:AT5G44260 dosa:Os01g0192000 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.