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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA06G033560
Reference: TK1151 Chr: Chr06 Coordinates: 9079617-9080513 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

897 bp · TkA06G033560|TK1151|cDNA

ATGGCGGCTTCCGTCGAAAACCGTCAGTTCCGCCATGAACATGGTGTTGTTCGTGCTTTCAGTCCTAATCATCAACGTTCTGATTCGCCAATCCGTGGCGGTATTAACTATCCCGCTGCTGCTAGAGAGTTTATGACGCCGAAGAAGCTACCTCCTGAAATTACCGATTCTAGTGACGATGAAGACGACGAGGGCGAGTATCGTGACGCCATTAAAAAGTCGAACGCTGAGTTGGAAAGCTCGGTTTTCGATCCCAGAGA...

897 bp · TkA06G033560|TK1151|CDS

ATGGCGGCTTCCGTCGAAAACCGTCAGTTCCGCCATGAACATGGTGTTGTTCGTGCTTTCAGTCCTAATCATCAACGTTCTGATTCGCCAATCCGTGGCGGTATTAACTATCCCGCTGCTGCTAGAGAGTTTATGACGCCGAAGAAGCTACCTCCTGAAATTACCGATTCTAGTGACGATGAAGACGACGAGGGCGAGTATCGTGACGCCATTAAAAAGTCGAACGCTGAGTTGGAAAGCTCGGTTTTCGATCCCAGAGA...

298 aa · TkA06G033560|TK1151|PROTEIN

MAASVENRQFRHEHGVVRAFSPNHQRSDSPIRGGINYPAAAREFMTPKKLPPEITDSSDDEDDEGEYRDAIKKSNAELESSVFDPRDLGTADQWIERNPSMVRLTGKHPFNSEPPLTKLMQHGFITPAAPLHYVRNHGAVPHATWDDWTVEICGLVKRPARFSMNQIANEFPSREFPATLVCAGNRRKEQNLTKQTIGFNWGAAGVSTSVWKGVPLVHILKRCGVYSRKKGAMNVCFEGAEDLPGGGGSKYGTSIKIEMA...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G033560
TK1151 IDTkA06G033560
OH-1004 IDLXL04_025885
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)99.300
Protein coverage (%)TK1151 97.987 / OH-1004 30.826
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G033560
LocationChr06:9079617-9080513 (+)
DescriptionSimilar to NIA: Nitrate reductase [NADH]
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_025885 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006790 sulfur compound metabolic process Biological Process
GO:0006809 nitric oxide biosynthetic process Biological Process
GO:0009416 response to light stimulus Biological Process
GO:0042128 nitrate assimilation Biological Process
GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H Molecular Function
GO:0008482 sulfite oxidase activity Molecular Function
GO:0009703 nitrate reductase (NADH) activity Molecular Function
GO:0020037 heme binding Molecular Function
GO:0030151 molybdenum ion binding Molecular Function
GO:0043546 molybdopterin cofactor binding Molecular Function
GO:0050464 nitrate reductase (NADPH) activity Molecular Function
GO:0071949 FAD binding Molecular Function
KEGG gene cross-referenceNo functional description available

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.371
Rank 1 · TkA06G033560 · TK1151
Cytoplasm0.252
Rank 2 · TkA06G033560 · TK1151
Plastid0.213
Rank 3 · TkA06G033560 · TK1151
Nucleus0.122
Rank 4 · TkA06G033560 · TK1151
Peroxisome0.082
Rank 5 · TkA06G033560 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00174Oxidored_molyb137-293 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G033560PF00174Oxidored_molyb1372939.5e-46156.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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