Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1002 bp · TkA06G011510|TK1151|cDNA
ATGAGGCTCTACGATCCGAACCAAGCGGTTCTACAAGCCTTGAGCGGGTCCAACATTGAAGTGATGATAGGTGTCCCAAATTCAGATCTCCAATATGTTGCTGCAAGTCGTGACAATGCATTTGATTGGGTATGGAAGAACGTTGCCAGCTGGCCTAGTATTAAATTCCGTTATATAGCGGTTGGAAACGAGGTTAAGCCATCTGATGGTACACTGGCTCCGCTAGTGCACCCTGCTCTGACTAATATCCATGAAGTTGT...
1002 bp · TkA06G011510|TK1151|CDS
ATGAGGCTCTACGATCCGAACCAAGCGGTTCTACAAGCCTTGAGCGGGTCCAACATTGAAGTGATGATAGGTGTCCCAAATTCAGATCTCCAATATGTTGCTGCAAGTCGTGACAATGCATTTGATTGGGTATGGAAGAACGTTGCCAGCTGGCCTAGTATTAAATTCCGTTATATAGCGGTTGGAAACGAGGTTAAGCCATCTGATGGTACACTGGCTCCGCTAGTGCACCCTGCTCTGACTAATATCCATGAAGTTGT...
Protein
Download Protein FASTA333 aa · TkA06G011510|TK1151|PROTEIN
MRLYDPNQAVLQALSGSNIEVMIGVPNSDLQYVAASRDNAFDWVWKNVASWPSIKFRYIAVGNEVKPSDGTLAPLVHPALTNIHEVVSFYGLKDQIKVSTSIDTTMIGVDFPPSQGAFRDDIRWYIDPIIGFLVAINAPLLVNVYPYFSLGRLLFTSYSGNPNVISLAYATFTSPGTVVQDGGNAYQNLFDAMVDVHYSALERIGASSVEIVISETGWPSDGAFGATFDNARTYYMNMVAHASREPMEEKRCAVVTGGNK...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA06G011510 |
|---|---|
| TK1151 ID | TkA06G011510 |
| OH-1004 ID | LXL04_033425 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 47.300 |
| Protein coverage (%) | TK1151 72.372 / OH-1004 69.345Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA06G011510 |
|---|---|
| Location | Chr06:3014036-3016334 (-) |
| Description | Similar to PR2: Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0005975 carbohydrate metabolic process Biological Process GO:0006952 defense response Biological Process GO:0009626 plant-type hypersensitive response Biological Process GO:0005576 extracellular region Cellular Component GO:0042973 glucan endo-1,3-beta-D-glucosidase activity Molecular Function |
| KEGG gene cross-reference | nta:107777766 nta:107789548 sly:543986 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00332Glyco_hydro_171-244 aaPF29664BtgE-BtgC_glyc-hydro7-66 aaPF29664BtgE-BtgC_glyc-hydro141-149 aaPF29664BtgE-BtgC_glyc-hydro193-223 aaPF00106adh_short252-297 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA06G011510 | PF00332 | Glyco_hydro_17 | 1 | 244 | 7.5e-68 | 230.1 |
| TkA06G011510 | PF29664 | BtgE-BtgC_glyc-hydro | 7 | 66 | 3.9e-06 | 27.0 |
| TkA06G011510 | PF29664 | BtgE-BtgC_glyc-hydro | 141 | 149 | 3.9e-06 | 27.0 |
| TkA06G011510 | PF29664 | BtgE-BtgC_glyc-hydro | 193 | 223 | 3.9e-06 | 27.0 |
| TkA06G011510 | PF00106 | adh_short | 252 | 297 | 5.7e-07 | 29.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.