Gene Card
Gene overview
cDNA / CDS / Protein Sequences
918 bp · TkA05G436000|TK1151|cDNA
TACAGAACTGACCACTTTTCAGTTTTCGAGACAAATTATCCCAAAACATGCCTCTTTACAGAATTACCGTCGGATCTCCGGGGGAGGCCGCCCACCCCAGTACACTGAAAGCCGGCCTATCGGAGTTCATCTCCACCTTCATTTTTGTATTCGCCGGCTCAGGATCCGGCATGGCCTACAGTAAGCTGACGTATGATGCCCCGGCTACACCGTCAGGACTAGTGGCGGCTTCACTATCCCATGCTTTTGCGTTATTTGTG...
753 bp · TkA05G436000|TK1151|CDS
ATGCCTCTTTACAGAATTACCGTCGGATCTCCGGGGGAGGCCGCCCACCCCAGTACACTGAAAGCCGGCCTATCGGAGTTCATCTCCACCTTCATTTTTGTATTCGCCGGCTCAGGATCCGGCATGGCCTACAGTAAGCTGACGTATGATGCCCCGGCTACACCGTCAGGACTAGTGGCGGCTTCACTATCCCATGCTTTTGCGTTATTTGTGGCGGTTTCAGTTGGTGCAAACATTTCCGGCGGTCATGTAAATCCGGC...
Protein
Download Protein FASTA250 aa · TkA05G436000|TK1151|PROTEIN
MPLYRITVGSPGEAAHPSTLKAGLSEFISTFIFVFAGSGSGMAYSKLTYDAPATPSGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFASFIGGNLSFLTAIVYWIGQLLGSVVACLLLQYVTGGMEPPAFGLSSDVTVGNALVLEIVMTFGLVYTVYATAVDPKKGNIGILAPLAIGLIVGANILVGGAYDGASMNPAVCFGPAVVSGVWKNHWVYWVGPFLGGTIAALIYDNIFIDEHEALPVTDY
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G436000 |
|---|---|
| TK1151 ID | TkA05G436000 |
| OH-1004 ID | LXL04_021968 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G436000 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:108852313-108853443 (+) | ||||||||||||
| Description | Similar to TIP1-3: Aquaporin TIP1-3 | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
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| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0006833 water transport Biological Process GO:0009414 response to water deprivation Biological Process GO:0009651 response to salt stress Biological Process GO:0015840 urea transport Biological Process GO:0080170 hydrogen peroxide transmembrane transport Biological Process GO:1902074 response to salt Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0000326 protein storage vacuole Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005774 vacuolar membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0009705 plant-type vacuole membrane Cellular Component | ||||||||||||
| KEGG gene cross-reference | ath:AT2G36830 ath:AT4G01470 mtr:25499345 zma:541893 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00230MIP15-234 aaPF06186DUF992154-200 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G436000 | PF00230 | MIP | 15 | 234 | 9.7e-74 | 248.6 |
| TkA05G436000 | PF06186 | DUF992 | 154 | 200 | 0.12 | 12.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.