Gene Card
Gene overview
cDNA / CDS / Protein Sequences
5068 bp · TkA05G425200|TK1151|cDNA
GGCACCATATAAAAACAGAGGGCTAATAGAATACTACTTCATCGTCTTCTTACACACGAACTCTTAACAAAAATCGATAACCATGGAATCGGCTTTTGGTTTCCGGCTGATTCCAACTACTCCTTCTTCCGTTCTCCCACAACACCTCCCCTTAAAGCTCAGATTACCGAGCTTACAACGTTCCAGCTTCGTTGAGCAGCAACGTAATCGAAAGAACGTGGTTACAAGTTGTTATGGTTCGGAAGAACACGGGCCGCTTG...
1086 bp · TkA05G425200|TK1151|CDS
ATGGAATCGGCTTTTGGTTTCCGGCTGATTCCAACTACTCCTTCTTCCGTTCTCCCACAACACCTCCCCTTAAAGCTCAGATTACCGAGCTTACAACGTTCCAGCTTCGTTGAGCAGCAACGTAATCGAAAGAACGTGGTTACAAGTTGTTATGGTTCGGAAGAACACGGGCCGCTTGATGGATTTCAGTTCACACCAACCAAGATTTTTATGGAAGAGGCAATCGGAGCTGAATATGGAGAAGGTTTTGAAACATTCAG...
Protein
Download Protein FASTA361 aa · TkA05G425200|TK1151|PROTEIN
MESAFGFRLIPTTPSSVLPQHLPLKLRLPSLQRSSFVEQQRNRKNVVTSCYGSEEHGPLDGFQFTPTKIFMEEAIGAEYGEGFETFRPDGPLKIDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWDNVVAGTQALKLSAWKQLAQEEGKEIPDDVHRLLLHGAPDHVLDKVLMWGNEACELERLKSKLSKLYSNNLLELSEPMDGLKEWLDAVSTARIPCAVVSSLDRRIMVEILEKMGLMTYFQAIVTEEDGMDSMA...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G425200 |
|---|---|
| TK1151 ID | TkA05G425200 |
| OH-1004 ID | LXL04_021815 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G425200 |
|---|---|
| Location | Chr05:106030217-106036750 (-) |
| Description | Similar to PYRP2: 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0005975 carbohydrate metabolic process Biological Process GO:0006468 protein phosphorylation Biological Process GO:0009231 riboflavin biosynthetic process Biological Process GO:0017000 antibiotic biosynthetic process Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0009507 chloroplast Cellular Component GO:0000287 magnesium ion binding Molecular Function GO:0008801 beta-phosphoglucomutase activity Molecular Function GO:0016787 hydrolase activity Molecular Function GO:0016791 phosphatase activity Molecular Function GO:0042803 protein homodimerization activity Molecular Function |
| KEGG gene cross-reference | ath:AT4G11570 bsu:BSU34550 ecj:JW2665 eco:b2690 ecoc:C3026_14810 tma:TM1254 tmi:THEMA_08065 tmm:Tmari_1259 tmw:THMA_1279 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF13419HAD_2124-297 aaPF00702Hydrolase141-292 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G425200 | PF13419 | HAD_2 | 124 | 297 | 9.6e-16 | 59.0 |
| TkA05G425200 | PF00702 | Hydrolase | 141 | 292 | 4.4e-09 | 37.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.