Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1443 bp · TkA05G403620|TK1151|cDNA
TGAAAGCGAACAAAGGGGCCACCGCGTCTACTACATCCACACCCTTCCAAATCGCTCCAAGCCCCCGCCCATTGACCTTTTGTCCTAAACAAAATCCCCCCTTTTGCTCTCTTCTTATTACTCTCCCGTTAGGTTTCAAAGATTCTTCCCTTCTCCGATCATGGAGCAGGCTGTTCTCGATGATATAATCCAGAGGCTGATTCAAGTTAAAGGCAAACCTGGTAAGCAGGTGCAACTCACTGAACCGGAAATCAAGCAAC...
996 bp · TkA05G403620|TK1151|CDS
ATGGAGCAGGCTGTTCTCGATGATATAATCCAGAGGCTGATTCAAGTTAAAGGCAAACCTGGTAAGCAGGTGCAACTCACTGAACCGGAAATCAAGCAACTTTGTGTTGTTTCTAAAGAGATCTTCTTACGCCAGCCTAATTTGCTGGAAATCGAAGCACCCATCAAGATTTGTGGCGATGTCCATGGTCAATACTCGGACCTTCTACGTCTTTTTGAGCACGGCGGATTACCTCCGGAAGCCAATTACTTGTTCCTTGG...
Protein
Download Protein FASTA331 aa · TkA05G403620|TK1151|PROTEIN
MEQAVLDDIIQRLIQVKGKPGKQVQLTEPEIKQLCVVSKEIFLRQPNLLEIEAPIKICGDVHGQYSDLLRLFEHGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFNVKLWKTFSDCFNCLPVAALIDDKILCMHGGLSPDLNNLDQIRNLRRPTDIPDSGLLCDLLWSDPCTEVKGWGMNDRGVSYTFGADIVTEFLQKHDLDLVCRAHQVVEDGYEFFADRQLV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G403620 |
|---|---|
| TK1151 ID | TkA05G403620 |
| OH-1004 ID | LXL04_021538 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 99.700 |
| Protein coverage (%) | TK1151 97.885 / OH-1004 98.182Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G403620 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:100423854-100426865 (+) | ||||||||||||
| Description | Similar to Os03g0268000: Serine/threonine-protein phosphatase PP1 | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
| ||||||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0006468 protein phosphorylation Biological Process GO:0006470 protein dephosphorylation Biological Process GO:0009740 gibberellic acid mediated signaling pathway Biological Process GO:0010161 red light signaling pathway Biological Process GO:0016311 dephosphorylation Biological Process GO:0000164 protein phosphatase type 1 complex Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0004722 protein serine/threonine phosphatase activity Molecular Function GO:0046872 metal ion binding Molecular Function | ||||||||||||
| KEGG gene cross-reference | ath:AT2G29400 ath:AT2G39840 dosa:Os03g0268000 nta:107829724 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF16891STPPase_N6-52 aaPF00149Metallophos54-247 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G403620 | PF16891 | STPPase_N | 6 | 52 | 1.5e-20 | 74.1 |
| TkA05G403620 | PF00149 | Metallophos | 54 | 247 | 4.5e-52 | 178.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.